2dmr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:57, 21 December 2022) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==DITHIONITE REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS==
==DITHIONITE REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS==
-
<StructureSection load='2dmr' size='340' side='right' caption='[[2dmr]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='2dmr' size='340' side='right'caption='[[2dmr]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2dmr]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_capsulatus Rhodobacter capsulatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DMR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DMR FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2dmr]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_capsulatus Rhodobacter capsulatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DMR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DMR FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=4MO:MOLYBDENUM(IV)+ION'>4MO</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=PGD:2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE+GUANOSINE+DINUCLEOTIDE'>PGD</scene>, <scene name='pdbligand=SO2:SULFUR+DIOXIDE'>SO2</scene></td></tr>
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=4MO:MOLYBDENUM(IV)+ION'>4MO</scene>, <scene name='pdbligand=O:OXYGEN+ATOM'>O</scene>, <scene name='pdbligand=PGD:2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE+GUANOSINE+DINUCLEOTIDE'>PGD</scene>, <scene name='pdbligand=SO2:SULFUR+DIOXIDE'>SO2</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dmr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dmr OCA], [http://pdbe.org/2dmr PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dmr RCSB], [http://www.ebi.ac.uk/pdbsum/2dmr PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dmr ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dmr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dmr OCA], [https://pdbe.org/2dmr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dmr RCSB], [https://www.ebi.ac.uk/pdbsum/2dmr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dmr ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/DSTOR_RHOCA DSTOR_RHOCA]] Catalyzes the reduction of dimethyl sulfoxide (DMSO) and trimethylamine N-oxide (TMAO) to dimethyl sulfide (DMS) and trimethylamine, respectively. The terminal DMSO reductase can also use various sulfoxides and N-oxide compounds as terminal electron acceptor in addition to DMSO and TMAO.<ref>PMID:2001248</ref> <ref>PMID:8856102</ref>
+
[https://www.uniprot.org/uniprot/DSTOR_RHOCA DSTOR_RHOCA] Catalyzes the reduction of dimethyl sulfoxide (DMSO) and trimethylamine N-oxide (TMAO) to dimethyl sulfide (DMS) and trimethylamine, respectively. The terminal DMSO reductase can also use various sulfoxides and N-oxide compounds as terminal electron acceptor in addition to DMSO and TMAO.<ref>PMID:2001248</ref> <ref>PMID:8856102</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 23: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Rhodobacter capsulatus]]
[[Category: Rhodobacter capsulatus]]
-
[[Category: Bailey, S]]
+
[[Category: Bailey S]]
-
[[Category: Mcalpine, A S]]
+
[[Category: Mcalpine AS]]
-
[[Category: Dithionite]]
+
-
[[Category: Dmso]]
+
-
[[Category: Molybdopterin]]
+
-
[[Category: Monoxo]]
+
-
[[Category: Reductase]]
+

Current revision

DITHIONITE REDUCED DMSO REDUCTASE FROM RHODOBACTER CAPSULATUS

PDB ID 2dmr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools