6gq9

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m (Protected "6gq9" [edit=sysop:move=sysop])
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'''Unreleased structure'''
 
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The entry 6gq9 is ON HOLD
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==Solution structure of the hazel allergen Cor a 1.0401==
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<StructureSection load='6gq9' size='340' side='right'caption='[[6gq9]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6gq9]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GQ9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6GQ9 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6gq9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gq9 OCA], [http://pdbe.org/6gq9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6gq9 RCSB], [http://www.ebi.ac.uk/pdbsum/6gq9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6gq9 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Hazelnut is one of the most frequent causes of food allergy. The major hazel allergen in Northern Europe is Cor a 1, which is homologous to the major birch pollen allergen Bet v 1. Both allergens belong to the pathogenesis related class PR-10. We determined the solution structure of Cor a 1.0401 from hazelnut and identified a natural ligand of the protein. The structure reveals the protein fold characteristic for PR-10 family members, which consists of a seven-stranded antiparallel beta-sheet, two short alpha-helices arranged in V-shape and a long C-terminal alpha-helix encompassing a hydrophobic pocket. However, despite the structural similarities between Cor a 1 and Bet v 1, they bind different ligands. We have shown previously that Bet v 1 binds to quercetin-3-O-sophoroside. Here, we isolated Cor a 1 from hazel pollen and identified the bound ligand, quercetin-3-O-(2"-O-beta-D-glucopyranosyl)-beta-D-galactopyranoside, by mass spectrometry and nuclear magnetic resonance spectroscopy (NMR). NMR experiments were performed to confirm binding. Remarkably, although it has been shown that PR-10 allergens show promiscuous binding behaviour in vitro, we can demonstrate that Cor a 1.0401 and Bet v 1.0101 exhibit highly selective binding for their specific ligand but not for the respective ligand of the other allergen.
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Authors:
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Identification of a natural ligand of the hazel allergen Cor a 1.,Jacob T, von Loetzen CS, Reuter A, Lacher U, Schiller D, Schobert R, Mahler V, Vieths S, Rosch P, Schweimer K, Wohrl BM Sci Rep. 2019 Jun 18;9(1):8714. doi: 10.1038/s41598-019-44999-2. PMID:31213622<ref>PMID:31213622</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6gq9" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Jacob, T P]]
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[[Category: Loetzen, C Seutter von]]
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[[Category: Schweimer, K]]
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[[Category: Woehrl, B M]]
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[[Category: Allergen]]
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[[Category: Bet v 1 homologue]]
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[[Category: Hydrophobic pocket]]
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[[Category: Pr-10 allergen]]

Current revision

Solution structure of the hazel allergen Cor a 1.0401

PDB ID 6gq9

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