2eq8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:53, 23 October 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp==
==Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp==
-
<StructureSection load='2eq8' size='340' side='right' caption='[[2eq8]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
+
<StructureSection load='2eq8' size='340' side='right'caption='[[2eq8]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2eq8]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Thet8 Thet8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2EQ8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2eq8]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EQ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EQ8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TTHA0233 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=300852 THET8])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Dihydrolipoyl_dehydrogenase Dihydrolipoyl dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.8.1.4 1.8.1.4] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2eq8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eq8 OCA], [https://pdbe.org/2eq8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2eq8 RCSB], [https://www.ebi.ac.uk/pdbsum/2eq8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2eq8 ProSAT], [https://www.topsan.org/Proteins/RSGI/2eq8 TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2eq8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2eq8 OCA], [http://pdbe.org/2eq8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2eq8 RCSB], [http://www.ebi.ac.uk/pdbsum/2eq8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2eq8 ProSAT], [http://www.topsan.org/Proteins/RSGI/2eq8 TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q5SLR0_THET8 Q5SLR0_THET8]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eq8_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eq/2eq8_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 22:
==See Also==
==See Also==
-
*[[Dihydrolipoamide acetyltransferase|Dihydrolipoamide acetyltransferase]]
+
*[[Dihydrolipoamide acetyltransferase 3D structures|Dihydrolipoamide acetyltransferase 3D structures]]
*[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
*[[Dihydrolipoamide dehydrogenase|Dihydrolipoamide dehydrogenase]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Dihydrolipoyl dehydrogenase]]
+
[[Category: Large Structures]]
-
[[Category: Thet8]]
+
[[Category: Thermus thermophilus HB8]]
-
[[Category: Kamiya, N]]
+
[[Category: Kamiya N]]
-
[[Category: Nakai, T]]
+
[[Category: Nakai T]]
-
[[Category: Structural genomic]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Protein-protein complex]]
+
-
[[Category: Rsgi]]
+

Current revision

Crystal structure of lipoamide dehydrogenase from thermus thermophilus HB8 with psbdp

PDB ID 2eq8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools