We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.

2fef

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:06, 6 November 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==The Crystal Structure of Protein PA2201 from Pseudomonas aeruginosa==
==The Crystal Structure of Protein PA2201 from Pseudomonas aeruginosa==
-
<StructureSection load='2fef' size='340' side='right' caption='[[2fef]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+
<StructureSection load='2fef' size='340' side='right'caption='[[2fef]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2fef]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseae Pseae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FEF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2FEF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2fef]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FEF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FEF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PA2201 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 PSEAE])</td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fef OCA], [https://pdbe.org/2fef PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fef RCSB], [https://www.ebi.ac.uk/pdbsum/2fef PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fef ProSAT], [https://www.topsan.org/Proteins/MCSG/2fef TOPSAN]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fef OCA], [http://pdbe.org/2fef PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2fef RCSB], [http://www.ebi.ac.uk/pdbsum/2fef PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2fef ProSAT], [http://www.topsan.org/Proteins/MCSG/2fef TOPSAN]</span></td></tr>
+
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9I1R6_PSEAE Q9I1R6_PSEAE]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 14: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/2fef_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fe/2fef_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 21: Line 22:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Pseae]]
+
[[Category: Large Structures]]
-
[[Category: Chruszcz, M]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Cymborowski, M T]]
+
[[Category: Chruszcz M]]
-
[[Category: Edwards, A M]]
+
[[Category: Cymborowski MT]]
-
[[Category: Evdokimova, E]]
+
[[Category: Edwards AM]]
-
[[Category: Joachimiak, A]]
+
[[Category: Evdokimova E]]
-
[[Category: Kudritska, M]]
+
[[Category: Joachimiak A]]
-
[[Category: Structural genomic]]
+
[[Category: Kudritska M]]
-
[[Category: Minor, W]]
+
[[Category: Minor W]]
-
[[Category: Savchenko, A]]
+
[[Category: Savchenko A]]
-
[[Category: Shumilin, I]]
+
[[Category: Shumilin I]]
-
[[Category: Wang, S]]
+
[[Category: Wang S]]
-
[[Category: Mcsg]]
+
-
[[Category: PSI, Protein structure initiative]]
+
-
[[Category: Sad]]
+
-
[[Category: Unknown function]]
+

Current revision

The Crystal Structure of Protein PA2201 from Pseudomonas aeruginosa

PDB ID 2fef

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools