User:Jaime Prilusky/Test/Viewer
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| - | + | <SX load='1stp' size='400' side='right' viewer='molstar' caption='Caption for this structure' >__NOTOC__ | |
| - | < | + | ==Selection of viewer engine== |
| - | + | The addition of the ''viewer'' parameter to ''<StructureSection'' allows to choose between alternative engines for rendering a structure. Current valid values are '''jmol''' <ref>Jmol: an open-source browser-based HTML5 viewer and stand-alone Java viewer for chemical structures in 3D [http://jmol.org] </ref> (default) and '''molstar''' <ref>Mol* (/'molstar/) is an open collaboration started by PDBe and RCSB PDB to provide a technology stack for data delivery and analysis tools of macromolecules [https://molstar.org/]</ref>. | |
| - | + | ==Under development== | |
| + | A few features need additional development to work under different viewers, like <scene>, initialView and SAT. Examples are these links to <scene name="/12/3456/Sample/1">color</scene> by Group, and to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. | ||
| + | ==Help on the tools== | ||
| + | The cheatsheet for using LiteMol viewer, available at [[http://www.ebi.ac.uk/pdbe/litemol PDBe]], should be Ok for the MolStar viewer in use. | ||
| + | ==Scrolling page== | ||
| + | Alice was beginning to get very tired of sitting by her sister on the bank, and of having nothing to do: once or twice she had peeped into the book her sister was reading, but it had no pictures or conversations in it, ‘and what is the use of a book,’ thought Alice ‘without pictures or conversations?’ | ||
| - | + | So she was considering in her own mind (as well as she could, for the hot day made her feel very sleepy and stupid), whether the pleasure of making a daisy-chain would be worth the trouble of getting up and picking the daisies, when suddenly a White Rabbit with pink eyes ran close by her. | |
| - | + | There was nothing so very remarkable in that; nor did Alice think it so very much out of the way to hear the Rabbit say to itself, `Oh dear! Oh dear! I shall be late!' (when she thought it over afterwards, it occurred to her that she ought to have wondered at this, but at the time it all seemed quite natural); but when the Rabbit actually took a watch out of its waistcoat-pocket, and looked at it, and then hurried on, Alice started to her feet, for it flashed across her mind that she had never before seen a rabbit with either a waistcoat-pocket, or a watch to take out of it, and burning with curiosity, she ran across the field after it, and fortunately was just in time to see it pop down a large rabbit-hole under the hedge. <ref>Down the Rabbit-Hole. Alice's Adventures in Wonderland, by Lewis Carroll</ref>. | |
| - | + | </SX> | |
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<references/> | <references/> | ||
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- ↑ Jmol: an open-source browser-based HTML5 viewer and stand-alone Java viewer for chemical structures in 3D [1]
- ↑ Mol* (/'molstar/) is an open collaboration started by PDBe and RCSB PDB to provide a technology stack for data delivery and analysis tools of macromolecules [2]
- ↑ Down the Rabbit-Hole. Alice's Adventures in Wonderland, by Lewis Carroll
