6drr
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6drr is ON HOLD Authors: Pluvinage, B., Boraston, A.B. Description: Crystal structure of Cj0485 dehydrogenase Category: Unreleased Structures [...) |
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of Cj0485 dehydrogenase== | |
+ | <StructureSection load='6drr' size='340' side='right'caption='[[6drr]], [[Resolution|resolution]] 1.60Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6drr]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DRR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DRR FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.599Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6drr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6drr OCA], [https://pdbe.org/6drr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6drr RCSB], [https://www.ebi.ac.uk/pdbsum/6drr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6drr ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q0PB28_CAMJE Q0PB28_CAMJE] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Although the gastrointestinal pathogen Campylobacter jejuni was considered asaccharolytic, >50% of sequenced isolates possess an operon for L-fucose utilization. In C. jejuni NCTC11168, this pathway confers L-fucose chemotaxis and competitive colonization advantages in the piglet diarrhea model, but the catabolic steps remain unknown. Here we solved the putative dehydrogenase structure, resembling FabG of Burkholderia multivorans. The C. jejuni enzyme, FucX, reduces L-fucose and D-arabinose in vitro and both sugars are catabolized by fuc-operon encoded enzymes. This enzyme alone confers chemotaxis to both sugars in a non-carbohydrate-utilizing C. jejuni strain. Although C. jejuni lacks fucosidases, the organism exhibits enhanced growth in vitro when co-cultured with Bacteroides vulgatus, suggesting scavenging may occur. Yet, when excess amino acids are available, C. jejuni prefers them to carbohydrates, indicating a metabolic hierarchy exists. Overall this study increases understanding of nutrient metabolism by this pathogen, and identifies interactions with other gut microbes. | ||
- | + | The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.,Garber JM, Nothaft H, Pluvinage B, Stahl M, Bian X, Porfirio S, Enriquez A, Butcher J, Huang H, Glushka J, Line E, Gerlt JA, Azadi P, Stintzi A, Boraston AB, Szymanski CM Commun Biol. 2020 Jan 7;3(1):2. doi: 10.1038/s42003-019-0727-5. PMID:31925306<ref>PMID:31925306</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Boraston | + | <div class="pdbe-citations 6drr" style="background-color:#fffaf0;"></div> |
- | [[Category: Pluvinage | + | == References == |
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Campylobacter jejuni]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Boraston AB]] | ||
+ | [[Category: Pluvinage B]] |
Current revision
Crystal structure of Cj0485 dehydrogenase
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