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6gsn

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'''Unreleased structure'''
 
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The entry 6gsn is ON HOLD until sometime in the future
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==Structure of a partial yeast 48S preinitiation complex in closed conformation==
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<SX load='6gsn' size='340' side='right' viewer='molstar' caption='[[6gsn]], [[Resolution|resolution]] 5.75&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6gsn]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Kluyveromyces_lactis_NRRL_Y-1140 Kluyveromyces lactis NRRL Y-1140]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GSN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6GSN FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 5.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=MET:METHIONINE'>MET</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6gsn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gsn OCA], [https://pdbe.org/6gsn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6gsn RCSB], [https://www.ebi.ac.uk/pdbsum/6gsn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6gsn ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q6CKL3_KLULA Q6CKL3_KLULA]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The eukaryotic initiation factor 3 (eIF3) complex is involved in every step of translation initiation, but there is limited understanding of its molecular functions. Here, we present a single particle electron cryomicroscopy (cryo-EM) reconstruction of yeast 48S ribosomal preinitiation complex (PIC) in an open conformation conducive to scanning, with core subunit eIF3b bound on the 40S interface near the decoding center in contact with the ternary complex eIF2.GTP.initiator tRNA. eIF3b is relocated together with eIF3i from their solvent interface locations observed in other PIC structures, with eIF3i lacking 40S contacts. Re-processing of micrographs of our previous 48S PIC in a closed state also suggests relocation of the entire eIF3b-3i-3g-3a-Cter module during the course of initiation. Genetic analysis indicates that high fidelity initiation depends on eIF3b interactions at the 40S subunit interface that promote the closed PIC conformation, or facilitate the relocation of eIF3b/eIF3i to the solvent interface, on start codon selection.
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Authors:
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Large-scale movement of eIF3 domains during translation initiation modulate start codon selection.,Llacer JL, Hussain T, Dong J, Villamayor L, Gordiyenko Y, Hinnebusch AG Nucleic Acids Res. 2021 Oct 14. pii: 6396891. doi: 10.1093/nar/gkab908. PMID:34648019<ref>PMID:34648019</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6gsn" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Ribosome 3D structures|Ribosome 3D structures]]
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== References ==
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<references/>
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__TOC__
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</SX>
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[[Category: Kluyveromyces lactis NRRL Y-1140]]
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[[Category: Large Structures]]
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[[Category: Hussain T]]
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[[Category: Llacer JL]]
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[[Category: Ramakrishnan V]]

Current revision

Structure of a partial yeast 48S preinitiation complex in closed conformation

6gsn, resolution 5.75Å

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