6gw6

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'''Unreleased structure'''
 
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The entry 6gw6 is ON HOLD
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==Structure of the Pseudomonas putida RES-Xre toxin-antitoxin complex==
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<StructureSection load='6gw6' size='340' side='right'caption='[[6gw6]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6gw6]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Psepk Psepk]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GW6 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6GW6 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AYO08_12385, B7H19_10550 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160488 PSEPK]), AYO08_12380, B7H19_10555, CBL13_00496, CBP06_13110 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=160488 PSEPK])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6gw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gw6 OCA], [http://pdbe.org/6gw6 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6gw6 RCSB], [http://www.ebi.ac.uk/pdbsum/6gw6 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6gw6 ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Type II toxin-antitoxin (TA) modules, which are important cellular regulators in prokaryotes, usually encode two proteins, a toxin that inhibits cell growth and a non-toxic and labile inhibitor (antitoxin) that binds to and neutralizes the toxin. Here, we demonstrate that the res-xre locus from Photorhabdus luminescens and other bacterial species function as bona fide TA modules in E. coli. The 2.2 A crystal structure of the intact Pseudomonas putida RES-Xre TA complex reveals an unusual 2:4 stoichiometry in which a central RES toxin dimer binds two Xre antitoxin dimers. The antitoxin dimers each expose two helix-turn-helix (HTH) DNA binding domains of the Cro repressor type, suggesting the TA complex is capable of binding the upstream promoter sequence on DNA. The toxin core domain shows structural similarity to ADP-ribosylating enzymes such as diphtheria toxin but has an atypical NAD(+) -binding pocket suggesting an alternative function. We show that activation of the toxin in vivo causes a depletion of intracellular NAD(+) levels eventually leading to inhibition of cell growth in E. coli and inhibition of global macromolecular biosynthesis. Both structure and activity are unprecedented among bacterial toxin-antitoxin systems, suggesting the functional scope of bacterial TA toxins is much wider than previously appreciated. This article is protected by copyright. All rights reserved.
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Authors: Senissar, M., Brodersen, D.E.
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The RES domain toxins of RES-Xre toxin-antitoxin modules induce cell stasis by degrading NAD().,Skjerning RB, Senissar M, Winther K, Gerdes K, Brodersen DE Mol Microbiol. 2018 Oct 13. doi: 10.1111/mmi.14150. PMID:30315706<ref>PMID:30315706</ref>
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Description: X-ray structure of the new family Toxin-Antitoxin type II system
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Brodersen, D.E]]
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<div class="pdbe-citations 6gw6" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Psepk]]
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[[Category: Brodersen, D E]]
[[Category: Senissar, M]]
[[Category: Senissar, M]]
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[[Category: Cro repressor]]
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[[Category: Nad+ glycohydrolase]]
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[[Category: Nadase]]
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[[Category: Res domain]]
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[[Category: Toxin]]
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[[Category: Toxin antitoxin type ii system]]
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[[Category: Xre]]

Current revision

Structure of the Pseudomonas putida RES-Xre toxin-antitoxin complex

PDB ID 6gw6

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