5frc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:20, 26 July 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structure of urate oxidase prepared by the 'soak-and-freeze' method under 42 bar of oxygen pressure==
==Structure of urate oxidase prepared by the 'soak-and-freeze' method under 42 bar of oxygen pressure==
-
<StructureSection load='5frc' size='340' side='right' caption='[[5frc]], [[Resolution|resolution]] 1.44&Aring;' scene=''>
+
<StructureSection load='5frc' size='340' side='right'caption='[[5frc]], [[Resolution|resolution]] 1.44&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[5frc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aspfl Aspfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5FRC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[5frc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_flavus Aspergillus flavus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5FRC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5FRC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AZA:8-AZAXANTHINE'>AZA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.443&#8491;</td></tr>
-
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AZA:8-AZAXANTHINE'>AZA</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Factor_independent_urate_hydroxylase Factor independent urate hydroxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.7.3.3 1.7.3.3] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5frc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5frc OCA], [https://pdbe.org/5frc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5frc RCSB], [https://www.ebi.ac.uk/pdbsum/5frc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5frc ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5frc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5frc OCA], [http://pdbe.org/5frc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5frc RCSB], [http://www.ebi.ac.uk/pdbsum/5frc PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5frc ProSAT]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/URIC_ASPFL URIC_ASPFL]] Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
+
[https://www.uniprot.org/uniprot/URIC_ASPFL URIC_ASPFL] Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
==See Also==
==See Also==
-
*[[Urate Oxidase|Urate Oxidase]]
+
*[[Urate oxidase 3D structures|Urate oxidase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aspfl]]
+
[[Category: Aspergillus flavus]]
-
[[Category: Factor independent urate hydroxylase]]
+
[[Category: Large Structures]]
-
[[Category: Carpentier, P]]
+
[[Category: Carpentier P]]
-
[[Category: Lafumat, B]]
+
[[Category: Colloc'h N]]
-
[[Category: Linden, P van der]]
+
[[Category: Lafumat B]]
-
[[Category: Mueller-Dieckmann, C]]
+
[[Category: Mueller-Dieckmann C]]
-
[[Category: Prange, T]]
+
[[Category: Prange T]]
-
[[Category: Royant, A]]
+
[[Category: Royant A]]
-
[[Category: H, N Colloc]]
+
[[Category: Van der Linden P]]
-
[[Category: Dioxygen]]
+
-
[[Category: Flash freezing]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Pressure]]
+
-
[[Category: Urate oxidase]]
+

Current revision

Structure of urate oxidase prepared by the 'soak-and-freeze' method under 42 bar of oxygen pressure

PDB ID 5frc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools