2he7
From Proteopedia
(Difference between revisions)
(One intermediate revision not shown.) | |||
Line 1: | Line 1: | ||
==FERM domain of EPB41L3 (DAL-1)== | ==FERM domain of EPB41L3 (DAL-1)== | ||
- | <StructureSection load='2he7' size='340' side='right' caption='[[2he7]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='2he7' size='340' side='right'caption='[[2he7]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2he7]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2he7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HE7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HE7 FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2he7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2he7 OCA], [https://pdbe.org/2he7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2he7 RCSB], [https://www.ebi.ac.uk/pdbsum/2he7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2he7 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/E41L3_HUMAN E41L3_HUMAN] Critical growth regulator in the pathogenesis of meningiomas. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Line 19: | Line 19: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2he7 ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2he7 ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
- | <div style="background-color:#fffaf0;"> | ||
- | == Publication Abstract from PubMed == | ||
- | Perturbed cell-adhesion mechanisms are crucial for tumor invasion and metastasis. A cell-adhesion protein, Tumor Suppressor in Lung Cancer 1 (TSLC1), is inactivated in a majority of metastatic cancers. DAL-1 (differentially expressed in adenocarcinoma of the lung protein), another tumor suppressor, binds through its FERM domain to the TSLC1 C-terminal, 4.1 glycophorin C-like, cytoplasmic domain. However, the molecular basis for this interaction is unknown. Here, we describe the crystal structure of a complex between the DAL-1 FERM domain and a portion of the TSLC1 cytoplasmic domain. DAL-1 binds to TSLC1 through conserved residues in a well-defined hydrophobic pocket in the DAL-1 FERM domain's structural C-lobe. From the crystal structure, it is apparent that Tyr406 and Thr408 in the TSLC1 cytoplasmic domain form the most important interactions with DAL-1 and this was also confirmed by surface plasmon resonance studies. Our results refute earlier exon deletion experiments that indicated that glycophorin-C interacts with the alpha-lobe of 4.1 FERM domains. | ||
- | |||
- | Structural basis of tumor suppressor in lung cancer 1 (TSLC1) binding to differentially expressed in adenocarcinoma of the lung (DAL-1/4.1B).,Busam RD, Thorsell AG, Flores A, Hammarstrom M, Persson C, Obrink B, Hallberg BM J Biol Chem. 2010 Dec 3. PMID:21131357<ref>PMID:21131357</ref> | ||
- | |||
- | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
- | </div> | ||
- | <div class="pdbe-citations 2he7" style="background-color:#fffaf0;"></div> | ||
- | == References == | ||
- | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: Arrowsmith | + | [[Category: Large Structures]] |
- | [[Category: Berglund | + | [[Category: Arrowsmith C]] |
- | [[Category: Busam | + | [[Category: Berglund H]] |
- | [[Category: Collins | + | [[Category: Busam RD]] |
- | [[Category: Edwards | + | [[Category: Collins R]] |
- | [[Category: Ehn | + | [[Category: Edwards A]] |
- | [[Category: Flodin | + | [[Category: Ehn M]] |
- | [[Category: Flores | + | [[Category: Flodin S]] |
- | [[Category: Graslund | + | [[Category: Flores A]] |
- | [[Category: Hallberg | + | [[Category: Graslund S]] |
- | [[Category: Hammarstrom | + | [[Category: Hallberg BM]] |
- | [[Category: Hogbom | + | [[Category: Hammarstrom M]] |
- | [[Category: Johansson | + | [[Category: Hogbom M]] |
- | [[Category: Karlberg | + | [[Category: Johansson I]] |
- | [[Category: Kotenyova | + | [[Category: Karlberg T]] |
- | [[Category: Nilsson-ehle | + | [[Category: Kotenyova T]] |
- | [[Category: Nilvebrandt | + | [[Category: Nilsson-ehle P]] |
- | [[Category: Norberg | + | [[Category: Nilvebrandt J]] |
- | [[Category: Nordlund | + | [[Category: Norberg P]] |
- | [[Category: Nyman | + | [[Category: Nordlund P]] |
- | [[Category: Ogg | + | [[Category: Nyman T]] |
- | [[Category: Persson | + | [[Category: Ogg D]] |
- | + | [[Category: Persson C]] | |
- | [[Category: Sagemark | + | [[Category: Sagemark J]] |
- | [[Category: Schiavone | + | [[Category: Schiavone LH]] |
- | [[Category: Stenmark | + | [[Category: Stenmark P]] |
- | [[Category: Sundstrom | + | [[Category: Sundstrom M]] |
- | [[Category: Thorsell | + | [[Category: Thorsell AG]] |
- | [[Category: Uppenberg | + | [[Category: Uppenberg J]] |
- | [[Category: | + | [[Category: Van den berg S]] |
- | + | [[Category: Weigelt J]] | |
- | [[Category: | + | |
- | + | ||
- | + | ||
- | + | ||
- | + |
Current revision
FERM domain of EPB41L3 (DAL-1)
|
Categories: Homo sapiens | Large Structures | Arrowsmith C | Berglund H | Busam RD | Collins R | Edwards A | Ehn M | Flodin S | Flores A | Graslund S | Hallberg BM | Hammarstrom M | Hogbom M | Johansson I | Karlberg T | Kotenyova T | Nilsson-ehle P | Nilvebrandt J | Norberg P | Nordlund P | Nyman T | Ogg D | Persson C | Sagemark J | Schiavone LH | Stenmark P | Sundstrom M | Thorsell AG | Uppenberg J | Van den berg S | Weigelt J