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| ==Structure of MurJ from Escherichia coli== | | ==Structure of MurJ from Escherichia coli== |
- | <StructureSection load='6cc4' size='340' side='right' caption='[[6cc4]], [[Resolution|resolution]] 3.50Å' scene=''> | + | <StructureSection load='6cc4' size='340' side='right'caption='[[6cc4]], [[Resolution|resolution]] 3.50Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[6cc4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_coli"_migula_1895 "bacillus coli" migula 1895]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CC4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CC4 FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[6cc4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CC4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CC4 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5Å</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">murJ, mviN, yceN, b1069, JW1056 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 "Bacillus coli" Migula 1895])</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cc4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cc4 OCA], [http://pdbe.org/6cc4 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cc4 RCSB], [http://www.ebi.ac.uk/pdbsum/6cc4 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cc4 ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6cc4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cc4 OCA], [https://pdbe.org/6cc4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6cc4 RCSB], [https://www.ebi.ac.uk/pdbsum/6cc4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6cc4 ProSAT]</span></td></tr> |
| </table> | | </table> |
| == Function == | | == Function == |
- | [[http://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX]] Electron-transport protein of unknown function. | + | [https://www.uniprot.org/uniprot/MURJ_ECOLI MURJ_ECOLI] Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.[HAMAP-Rule:MF_02078]<ref>PMID:18708495</ref> <ref>PMID:18832143</ref> <ref>PMID:25013077</ref> [https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function. |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Bacillus coli migula 1895]] | + | [[Category: Escherichia coli]] |
- | [[Category: Kruse, A C]] | + | [[Category: Large Structures]] |
- | [[Category: Zheng, S]] | + | [[Category: Kruse AC]] |
- | [[Category: Lipid ii flippase]] | + | [[Category: Zheng S]] |
- | [[Category: Mop superfamily]]
| + | |
- | [[Category: Peptidoglycan synthesis]]
| + | |
- | [[Category: Transport protein]]
| + | |
| Structural highlights
Function
MURJ_ECOLI Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.[HAMAP-Rule:MF_02078][1] [2] [3] C562_ECOLX Electron-transport protein of unknown function.
Publication Abstract from PubMed
The peptidoglycan cell wall provides an essential protective barrier in almost all bacteria, defining cellular morphology and conferring resistance to osmotic stress and other environmental hazards. The precursor to peptidoglycan, lipid II, is assembled on the inner leaflet of the plasma membrane. However, peptidoglycan polymerization occurs on the outer face of the plasma membrane, and lipid II must be flipped across the membrane by the MurJ protein before its use in peptidoglycan synthesis. Due to its central role in cell wall assembly, MurJ is of fundamental importance in microbial cell biology and is a prime target for novel antibiotic development. However, relatively little is known regarding the mechanisms of MurJ function, and structural data for MurJ are available only from the extremophile Thermosipho africanus Here, we report the crystal structure of substrate-free MurJ from the gram-negative model organism Escherichia coli, revealing an inward-open conformation. Taking advantage of the genetic tractability of E. coli, we performed high-throughput mutagenesis and next-generation sequencing to assess mutational tolerance at every amino acid in the protein, providing a detailed functional and structural map for the enzyme and identifying sites for inhibitor development. Lastly, through the use of sequence coevolution analysis, we identify functionally important interactions in the outward-open state of the protein, supporting a rocker-switch model for lipid II transport.
Structure and mutagenic analysis of the lipid II flippase MurJ from Escherichia coli.,Zheng S, Sham LT, Rubino FA, Brock KP, Robins WP, Mekalanos JJ, Marks DS, Bernhardt TG, Kruse AC Proc Natl Acad Sci U S A. 2018 Jun 11. pii: 1802192115. doi:, 10.1073/pnas.1802192115. PMID:29891673[4]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Inoue A, Murata Y, Takahashi H, Tsuji N, Fujisaki S, Kato J. Involvement of an essential gene, mviN, in murein synthesis in Escherichia coli. J Bacteriol. 2008 Nov;190(21):7298-301. doi: 10.1128/JB.00551-08. Epub 2008 Aug, 15. PMID:18708495 doi:http://dx.doi.org/10.1128/JB.00551-08
- ↑ Ruiz N. Bioinformatics identification of MurJ (MviN) as the peptidoglycan lipid II flippase in Escherichia coli. Proc Natl Acad Sci U S A. 2008 Oct 7;105(40):15553-7. doi:, 10.1073/pnas.0808352105. Epub 2008 Oct 1. PMID:18832143 doi:http://dx.doi.org/10.1073/pnas.0808352105
- ↑ Sham LT, Butler EK, Lebar MD, Kahne D, Bernhardt TG, Ruiz N. Bacterial cell wall. MurJ is the flippase of lipid-linked precursors for peptidoglycan biogenesis. Science. 2014 Jul 11;345(6193):220-2. doi: 10.1126/science.1254522. PMID:25013077 doi:http://dx.doi.org/10.1126/science.1254522
- ↑ Zheng S, Sham LT, Rubino FA, Brock KP, Robins WP, Mekalanos JJ, Marks DS, Bernhardt TG, Kruse AC. Structure and mutagenic analysis of the lipid II flippase MurJ from Escherichia coli. Proc Natl Acad Sci U S A. 2018 Jun 11. pii: 1802192115. doi:, 10.1073/pnas.1802192115. PMID:29891673 doi:http://dx.doi.org/10.1073/pnas.1802192115
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