2nrk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:22, 17 October 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2nrk.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of conserved protein GrpB from Enterococcus faecalis==
-
|PDB= 2nrk |SIZE=350|CAPTION= <scene name='initialview01'>2nrk</scene>, resolution 1.65&Aring;
+
<StructureSection load='2nrk' size='340' side='right'caption='[[2nrk]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2nrk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NRK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2NRK FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
|GENE= UPF0157 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1351 Enterococcus faecalis])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2320 GrpB]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2nrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nrk OCA], [https://pdbe.org/2nrk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2nrk RCSB], [https://www.ebi.ac.uk/pdbsum/2nrk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2nrk ProSAT], [https://www.topsan.org/Proteins/MCSG/2nrk TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2nrk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2nrk OCA], [http://www.ebi.ac.uk/pdbsum/2nrk PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2nrk RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q837C3_ENTFA Q837C3_ENTFA]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of conserved protein GrpB from Enterococcus faecalis'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nr/2nrk_consurf.spt"</scriptWhenChecked>
-
2NRK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2NRK OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Enterococcus faecalis]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Bargassa, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2nrk ConSurf].
-
[[Category: Cuff, M E.]]
+
<div style="clear:both"></div>
-
[[Category: Joachimiak, A.]]
+
__TOC__
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
</StructureSection>
-
[[Category: Mulligan, R.]]
+
[[Category: Enterococcus faecalis V583]]
-
[[Category: enterococcus faecali]]
+
[[Category: Large Structures]]
-
[[Category: glutamate-rich protein]]
+
[[Category: Bargassa M]]
-
[[Category: mcsg]]
+
[[Category: Cuff ME]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Joachimiak A]]
-
[[Category: pfam04229]]
+
[[Category: Mulligan R]]
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: upf0157]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:07:15 2008''
+

Current revision

Crystal structure of conserved protein GrpB from Enterococcus faecalis

PDB ID 2nrk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools