2ixe
From Proteopedia
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==Crystal structure of the ATPase domain of TAP1 with ATP (D645N mutant)== | ==Crystal structure of the ATPase domain of TAP1 with ATP (D645N mutant)== | ||
- | <StructureSection load='2ixe' size='340' side='right' caption='[[2ixe]], [[Resolution|resolution]] 2.00Å' scene=''> | + | <StructureSection load='2ixe' size='340' side='right'caption='[[2ixe]], [[Resolution|resolution]] 2.00Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2ixe]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2ixe]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IXE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IXE FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ixe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ixe OCA], [https://pdbe.org/2ixe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ixe RCSB], [https://www.ebi.ac.uk/pdbsum/2ixe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ixe ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/TAP1_RAT TAP1_RAT] Involved in the transport of antigens from the cytoplasm to the endoplasmic reticulum for association with MHC class I molecules. Also acts as a molecular scaffold for the final stage of MHC class I folding, namely the binding of peptide. Nascent MHC class I molecules associate with TAP via tapasin (By similarity). |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: | + | [[Category: Rattus norvegicus]] |
- | [[Category: Gaudet | + | [[Category: Ferrin-O'Connell I]] |
- | [[Category: Ng | + | [[Category: Gaudet R]] |
- | [[Category: Procko | + | [[Category: Ng S-L]] |
- | + | [[Category: Procko E]] | |
- | + |
Current revision
Crystal structure of the ATPase domain of TAP1 with ATP (D645N mutant)
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