2jix
From Proteopedia
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==Crystal structure of ABT-007 FAB fragment with the soluble domain of EPO receptor== | ==Crystal structure of ABT-007 FAB fragment with the soluble domain of EPO receptor== | ||
- | <StructureSection load='2jix' size='340' side='right' caption='[[2jix]], [[Resolution|resolution]] 3.20Å' scene=''> | + | <StructureSection load='2jix' size='340' side='right'caption='[[2jix]], [[Resolution|resolution]] 3.20Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2jix]] is a 9 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2jix]] is a 9 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JIX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JIX FirstGlance]. <br> |
- | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2Å</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jix FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jix OCA], [https://pdbe.org/2jix PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jix RCSB], [https://www.ebi.ac.uk/pdbsum/2jix PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jix ProSAT]</span></td></tr> |
</table> | </table> | ||
- | == Disease == | ||
- | [[http://www.uniprot.org/uniprot/EPOR_HUMAN EPOR_HUMAN]] Defects in EPOR are the cause of familial erythrocytosis type 1 (ECYT1) [MIM:[http://omim.org/entry/133100 133100]]. ECYT1 is an autosomal dominant disorder characterized by increased serum red blood cell mass, elevated hemoglobin and hematocrit, hypersensitivity of erythroid progenitors to erythropoietin, erythropoietin low serum levels, and no increase in platelets nor leukocytes. It has a relatively benign course and does not progress to leukemia.<ref>PMID:8506290</ref> <ref>PMID:8174675</ref> <ref>PMID:8608241</ref> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/Q7Z3Y4_HUMAN Q7Z3Y4_HUMAN] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/2jix_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ji/2jix_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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*[[Antibody 3D structures|Antibody 3D structures]] | *[[Antibody 3D structures|Antibody 3D structures]] | ||
*[[Erythropoietin receptor|Erythropoietin receptor]] | *[[Erythropoietin receptor|Erythropoietin receptor]] | ||
+ | *[[3D structures of human antibody|3D structures of human antibody]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: | + | [[Category: Homo sapiens]] |
- | [[Category: DeVries | + | [[Category: Large Structures]] |
- | [[Category: Egan | + | [[Category: DeVries P]] |
- | [[Category: Harlan | + | [[Category: Egan DA]] |
- | [[Category: Jakob | + | [[Category: Harlan JE]] |
- | [[Category: Lacy | + | [[Category: Jakob CG]] |
- | [[Category: Lesniewski | + | [[Category: Lacy SE]] |
- | [[Category: Liu | + | [[Category: Lesniewski RR]] |
- | [[Category: Reilly | + | [[Category: Liu Z]] |
- | [[Category: Simmer | + | [[Category: Reilly EB]] |
- | [[Category: Stoll | + | [[Category: Simmer RL]] |
- | [[Category: Xie | + | [[Category: Stoll VS]] |
- | + | [[Category: Xie N]] | |
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Current revision
Crystal structure of ABT-007 FAB fragment with the soluble domain of EPO receptor
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Categories: Homo sapiens | Large Structures | DeVries P | Egan DA | Harlan JE | Jakob CG | Lacy SE | Lesniewski RR | Liu Z | Reilly EB | Simmer RL | Stoll VS | Xie N