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| ==Solution Structure of the S. Aureus Sortase A-substrate Complex== | | ==Solution Structure of the S. Aureus Sortase A-substrate Complex== |
- | <StructureSection load='2kid' size='340' side='right' caption='[[2kid]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2kid' size='340' side='right'caption='[[2kid]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2kid]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"micrococcus_aureus"_(rosenbach_1884)_zopf_1885 "micrococcus aureus" (rosenbach 1884) zopf 1885]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KID OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2KID FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2kid]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KID OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KID FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=B27:(2R,3S)+3-AMINO-4-MERCAPTO-2-BUTANOL'>B27</scene>, <scene name='pdbligand=PHQ:BENZYL+CHLOROCARBONATE'>PHQ</scene></td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=B27:(2R,3S)+3-AMINO-4-MERCAPTO-2-BUTANOL'>B27</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PHQ:BENZYL+CHLOROCARBONATE'>PHQ</scene></td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1ija|1ija]], [[1t2p|1t2p]]</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kid OCA], [https://pdbe.org/2kid PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kid RCSB], [https://www.ebi.ac.uk/pdbsum/2kid PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kid ProSAT]</span></td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">srtA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 "Micrococcus aureus" (Rosenbach 1884) Zopf 1885])</td></tr>
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- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2kid FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kid OCA], [http://pdbe.org/2kid PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2kid RCSB], [http://www.ebi.ac.uk/pdbsum/2kid PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2kid ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q9S446_STAAU Q9S446_STAAU] |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Clemens, J J]] | + | [[Category: Large Structures]] |
- | [[Category: Clubb, R T]] | + | [[Category: Staphylococcus aureus]] |
- | [[Category: Fadeev, E A]] | + | [[Category: Clemens JJ]] |
- | [[Category: Jung, M E]] | + | [[Category: Clubb RT]] |
- | [[Category: Liew, C K]] | + | [[Category: Fadeev EA]] |
- | [[Category: Suree, N]] | + | [[Category: Jung ME]] |
- | [[Category: Thieu, W]] | + | [[Category: Liew CK]] |
- | [[Category: Villareal, V A]] | + | [[Category: Suree N]] |
- | [[Category: Eight stranded beta barrel]] | + | [[Category: Thieu W]] |
- | [[Category: Enzyme-substrate complex]] | + | [[Category: Villareal VA]] |
- | [[Category: Hydrolase-hydrolase inhibitor complex]]
| + | |
- | [[Category: Sortase]]
| + | |
- | [[Category: Transpeptidase]]
| + | |
| Structural highlights
Function
Q9S446_STAAU
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
In Gram-positive bacteria, sortase enzymes assemble surface proteins and pili in the cell wall envelope. Sortases catalyze a transpeptidation reaction that joins a highly conserved LPXTG sorting signal within their polypeptide substrate to the cell wall or to other pilin subunits. The molecular basis of transpeptidation and sorting signal recognition are not well understood, because the intermediates of catalysis are short lived. We have overcome this problem by synthesizing an analog of the LPXTG signal whose stable covalent complex with the enzyme mimics a key thioacyl catalytic intermediate. Here we report the solution structure and dynamics of its covalent complex with the Staphylococcus aureus SrtA sortase. In marked contrast to a previously reported crystal structure, we show that SrtA adaptively recognizes the LPXTG sorting signal by closing and immobilizing an active site loop. We have also used chemical shift mapping experiments to localize the binding site for the triglycine portion of lipid II, the second substrate to which surface proteins are attached. We propose a unified model of the transpeptidation reaction that explains the functions of key active site residues. Since the sortase-catalyzed anchoring reaction is required for the virulence of a number of bacterial pathogens, the results presented here may facilitate the development of new anti-infective agents.
The structure of the Staphylococcus aureus sortase-substrate complex reveals how the universally conserved LPXTG sorting signal is recognized.,Suree N, Liew CK, Villareal VA, Thieu W, Fadeev EA, Clemens JJ, Jung ME, Clubb RT J Biol Chem. 2009 Sep 4;284(36):24465-77. Epub 2009 Jul 10. PMID:19592495[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Suree N, Liew CK, Villareal VA, Thieu W, Fadeev EA, Clemens JJ, Jung ME, Clubb RT. The structure of the Staphylococcus aureus sortase-substrate complex reveals how the universally conserved LPXTG sorting signal is recognized. J Biol Chem. 2009 Sep 4;284(36):24465-77. Epub 2009 Jul 10. PMID:19592495 doi:10.1074/jbc.M109.022624
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