This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2l1u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:51, 1 May 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Structure-Functional Analysis of Mammalian MsrB2 protein==
==Structure-Functional Analysis of Mammalian MsrB2 protein==
-
<StructureSection load='2l1u' size='340' side='right' caption='[[2l1u]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2l1u' size='340' side='right'caption='[[2l1u]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2l1u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lk3_transgenic_mice Lk3 transgenic mice]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L1U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2L1U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2l1u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L1U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L1U FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Msrb2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 LK3 transgenic mice])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2l1u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l1u OCA], [http://pdbe.org/2l1u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2l1u RCSB], [http://www.ebi.ac.uk/pdbsum/2l1u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2l1u ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l1u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l1u OCA], [https://pdbe.org/2l1u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l1u RCSB], [https://www.ebi.ac.uk/pdbsum/2l1u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l1u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/MSRB2_MOUSE MSRB2_MOUSE]] Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases, methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residue. Upon oxidative stress, may play a role in the preservation of mitochondrial integrity by decreasing the intracellular reactive oxygen species build-up through its scavenging role, hence contributing to cell survival and protein maintenance.<ref>PMID:14699060</ref> <ref>PMID:23911929</ref>
+
[https://www.uniprot.org/uniprot/MSRB2_MOUSE MSRB2_MOUSE] Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases, methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residue. Upon oxidative stress, may play a role in the preservation of mitochondrial integrity by decreasing the intracellular reactive oxygen species build-up through its scavenging role, hence contributing to cell survival and protein maintenance.<ref>PMID:14699060</ref> <ref>PMID:23911929</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 24: Line 24:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Lk3 transgenic mice]]
+
[[Category: Large Structures]]
-
[[Category: Aachmann, F L]]
+
[[Category: Mus musculus]]
-
[[Category: Conte, R Del]]
+
[[Category: Aachmann FL]]
-
[[Category: Dikiy, A]]
+
[[Category: Del Conte R]]
-
[[Category: Gladyshev, V N]]
+
[[Category: Dikiy A]]
-
[[Category: Kim, H]]
+
[[Category: Gladyshev VN]]
-
[[Category: Kwak, G]]
+
[[Category: Kim H]]
-
[[Category: Methionine sulfoxide reductase]]
+
[[Category: Kwak G]]
-
[[Category: Msrb]]
+
-
[[Category: Oxidoreductase]]
+

Current revision

Structure-Functional Analysis of Mammalian MsrB2 protein

PDB ID 2l1u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools