6cp0

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==SdcA in complex with the E2, UbcH5C==
==SdcA in complex with the E2, UbcH5C==
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<StructureSection load='6cp0' size='340' side='right' caption='[[6cp0]], [[Resolution|resolution]] 3.01&Aring;' scene=''>
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<StructureSection load='6cp0' size='340' side='right'caption='[[6cp0]], [[Resolution|resolution]] 3.01&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6cp0]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CP0 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6CP0 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6cp0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Legionella_pneumophila Legionella pneumophila]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6CP0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6CP0 FirstGlance]. <br>
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</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6cp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cp0 OCA], [http://pdbe.org/6cp0 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6cp0 RCSB], [http://www.ebi.ac.uk/pdbsum/6cp0 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6cp0 ProSAT]</span></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.01&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6cp0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6cp0 OCA], [https://pdbe.org/6cp0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6cp0 RCSB], [https://www.ebi.ac.uk/pdbsum/6cp0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6cp0 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/UB2D3_HUMAN UB2D3_HUMAN]] Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-11'-, as well as 'Lys-48'-linked polyubiquitination. Cooperates with the E2 CDC34 and the SCF(FBXW11) E3 ligase complex for the polyubiquitination of NFKBIA leading to its subsequent proteasomal degradation. Acts as an initiator E2, priming the phosphorylated NFKBIA target at positions 'Lys-21' and/or 'Lys-22' with a monoubiquitin. Ubiquitin chain elongation is then performed by CDC34, building ubiquitin chains from the UBE2D3-primed NFKBIA-linked ubiquitin. Acts also as an initiator E2, in conjunction with RNF8, for the priming of PCNA. Monoubiquitination of PCNA, and its subsequent polyubiquitination, are essential events in the operation of the DNA damage tolerance (DDT) pathway that is activated after DNA damage caused by UV or chemical agents during S-phase. Associates with the BRCA1/BARD1 E3 ligase complex to perform ubiquitination at DNA damage sites following ionizing radiation leading to DNA repair. Targets DAPK3 for ubiquitination which influences promyelocytic leukemia protein nuclear body (PML-NB) formation in the nucleus. In conjunction with the MDM2 and TOPORS E3 ligases, functions ubiquitination of p53/TP53. Supports NRDP1-mediated ubiquitination and degradation of ERBB3 and of BRUCE which triggers apoptosis. In conjunction with the CBL E3 ligase, targets EGFR for polyubiquitination at the plasma membrane as well as during its internalization and transport on endosomes. In conjunction with the STUB1 E3 quality control E3 ligase, ubiquitinates unfolded proteins to catalyze their immediate destruction (By similarity).<ref>PMID:10329681</ref> <ref>PMID:11743028</ref> <ref>PMID:12646252</ref> <ref>PMID:15247280</ref> <ref>PMID:15280377</ref> <ref>PMID:15496420</ref> <ref>PMID:16628214</ref> <ref>PMID:18515077</ref> <ref>PMID:18948756</ref> <ref>PMID:18508924</ref> <ref>PMID:18284575</ref> <ref>PMID:20061386</ref> <ref>PMID:20347421</ref> <ref>PMID:21532592</ref>
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[https://www.uniprot.org/uniprot/Q6RCR3_LEGPN Q6RCR3_LEGPN]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6cp0" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6cp0" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[3D structures of ubiquitin conjugating enzyme|3D structures of ubiquitin conjugating enzyme]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Huang, Q]]
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[[Category: Homo sapiens]]
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[[Category: Mao, Y]]
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[[Category: Large Structures]]
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[[Category: Wasilko, D J]]
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[[Category: Legionella pneumophila]]
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[[Category: Bacterial e3 ligase]]
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[[Category: Huang Q]]
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[[Category: Complex]]
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[[Category: Mao Y]]
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[[Category: E2]]
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[[Category: Wasilko DJ]]
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[[Category: Ligase]]
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Current revision

SdcA in complex with the E2, UbcH5C

PDB ID 6cp0

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