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| ==Solution structure of the R. rickettsii cold shock-like protein== | | ==Solution structure of the R. rickettsii cold shock-like protein== |
- | <StructureSection load='2lss' size='340' side='right' caption='[[2lss]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2lss' size='340' side='right'caption='[[2lss]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2lss]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ricrs Ricrs]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LSS OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2LSS FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2lss]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rickettsia_rickettsii_str._'Sheila_Smith' Rickettsia rickettsii str. 'Sheila Smith']. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LSS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LSS FirstGlance]. <br> |
- | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">A1G_05630 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=392021 RICRS])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2lss FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lss OCA], [http://pdbe.org/2lss PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2lss RCSB], [http://www.ebi.ac.uk/pdbsum/2lss PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2lss ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lss FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lss OCA], [https://pdbe.org/2lss PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lss RCSB], [https://www.ebi.ac.uk/pdbsum/2lss PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lss ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/A0A0H3AYC3_RICRS A0A0H3AYC3_RICRS] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Ricrs]] | + | [[Category: Large Structures]] |
- | [[Category: Fuchs, A M]] | + | [[Category: Rickettsia rickettsii str. 'Sheila Smith']] |
- | [[Category: Gerarden, K P]] | + | [[Category: Fuchs AM]] |
- | [[Category: Koch, J M]] | + | [[Category: Gerarden KP]] |
- | [[Category: Mueller, M M]] | + | [[Category: Koch JM]] |
- | [[Category: Peterson, F C]] | + | [[Category: Mueller MM]] |
- | [[Category: Veldkamp, C T]] | + | [[Category: Peterson FC]] |
- | [[Category: Cold shock-like protein]] | + | [[Category: Veldkamp CT]] |
- | [[Category: Csd]]
| + | |
- | [[Category: Csp]]
| + | |
- | [[Category: Dna binding protein]]
| + | |
- | [[Category: Ob fold]]
| + | |
- | [[Category: Oligonucleotide binding fold]]
| + | |
- | [[Category: Rna binding protein]]
| + | |
| Structural highlights
Function
A0A0H3AYC3_RICRS
Publication Abstract from PubMed
Rocky Mountain spotted fever is caused by Rickettsia rickettsii infection. R. rickettsii can be transmitted to mammals, including humans, through the bite of an infected hard-bodied tick of the family Ixodidae. Since the R. rickettsii genome contains only one cold-shock-like protein and given the essential nature of cold-shock proteins in other bacteria, the structure of the cold-shock-like protein from R. rickettsii was investigated. With the exception of a short alpha-helix found between beta-strands 3 and 4, the solution structure of the R. rickettsii cold-shock-like protein has the typical Greek-key five-stranded beta-barrel structure found in most cold-shock domains. Additionally, the R. rickettsii cold-shock-like protein, with a DeltaG of unfolding of 18.4 kJ mol(-1), has a similar stability when compared with other bacterial cold-shock proteins.
Solution structure of the cold-shock-like protein from Rickettsia rickettsii.,Gerarden KP, Fuchs AM, Koch JM, Mueller MM, Graupner DR, O'Rorke JT, Frost CD, Heinen HA, Lackner ER, Schoeller SJ, House PG, Peterson FC, Veldkamp CT Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Nov 1;68(Pt 11):1284-8., doi: 10.1107/S174430911203881X. Epub 2012 Oct 26. PMID:23143233[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Gerarden KP, Fuchs AM, Koch JM, Mueller MM, Graupner DR, O'Rorke JT, Frost CD, Heinen HA, Lackner ER, Schoeller SJ, House PG, Peterson FC, Veldkamp CT. Solution structure of the cold-shock-like protein from Rickettsia rickettsii. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Nov 1;68(Pt 11):1284-8., doi: 10.1107/S174430911203881X. Epub 2012 Oct 26. PMID:23143233 doi:http://dx.doi.org/10.1107/S174430911203881X
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