6h3g

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'''Unreleased structure'''
 
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The entry 6h3g is ON HOLD until Paper Publication
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==Alcohol oxidase from Phanerochaete chrysosporium==
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<StructureSection load='6h3g' size='340' side='right'caption='[[6h3g]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6h3g]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Chrysosporium_pruinosum_(gilman_&_abbott)_carmich. Chrysosporium pruinosum (gilman & abbott) carmich.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6H3G OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6H3G FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">aox1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5306 Chrysosporium pruinosum (Gilman & Abbott) Carmich.])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6h3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6h3g OCA], [http://pdbe.org/6h3g PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6h3g RCSB], [http://www.ebi.ac.uk/pdbsum/6h3g PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6h3g ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Glycerol is a major byproduct of biodiesel production and enzymes that oxidize this compound have been long sought after. The recently described alcohol oxidase from the white-rot basidiomycete Phanerochaete chrysosporium (PcAOX) was reported to feature very mild activity on glycerol. Here we describe the comprehensive structural and biochemical characterization of this enzyme. PcAOX was expressed in Escherichia coli in high yields and displayed high thermostability. Steady-state kinetics revealed that PcAOX is highly active towards methanol, ethanol, and 1-propanol (kcat = 18, 19, and 11 s-1, respectively), but showed very limited activity towards glycerol (kcat = 0.2 s-1 at 2 M substrate). The crystal structure of the homo-octameric PcAOX was determined at 2.6 A resolution. The catalytic center is a remarkable solvent-inaccessible cavity located at the re side of the flavin cofactor. Its small size explains the observed preference for methanol and ethanol as best substrates. These findings led us to design several cavity-enlarging mutants with significantly improved activity towards glycerol. Among them, the F101S variant had a high kcat value of 3 s-1 retaining a high degree of thermostability. The crystal structure of F101S PcAOX was solved, confirming the site of mutation and the larger substrate-binding pocket. Our data demonstrate that PcAOX is a very promising enzyme for glycerol biotransformation.
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Authors: Nguyen, Q.-T., Romero, E., Dijkman, W.P., de Vasconcellos, S.P., Binda, C., Mattevi, A., Fraaije, M.W.
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Structure-based engineering of Phanerochaete chrysosporium alcohol oxidase for enhanced oxidative power towards glycerol.,Nguyen QT, Romero E, Dijkman W, de Vasconcellos SP, Binda C, Mattevi A, Fraaije MW Biochemistry. 2018 Oct 1. doi: 10.1021/acs.biochem.8b00918. PMID:30272958<ref>PMID:30272958</ref>
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Description: Alcohol oxidase from Phanerochaete chrysosporium
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Fraaije, M.W]]
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<div class="pdbe-citations 6h3g" style="background-color:#fffaf0;"></div>
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[[Category: Mattevi, A]]
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== References ==
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[[Category: Dijkman, W.P]]
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<references/>
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[[Category: Nguyen, Q.-T]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Binda, C]]
[[Category: Binda, C]]
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[[Category: De Vasconcellos, S.P]]
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[[Category: Dijkman, W P]]
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[[Category: Fraaije, M W]]
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[[Category: Mattevi, A]]
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[[Category: Nguyen, Q T]]
[[Category: Romero, E]]
[[Category: Romero, E]]
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[[Category: Vasconcellos, S P.de]]
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[[Category: Alcohol oxidase]]
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[[Category: Fad-binding domain]]
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[[Category: Octamer]]
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[[Category: Oxidoreductase]]

Current revision

Alcohol oxidase from Phanerochaete chrysosporium

PDB ID 6h3g

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