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| ==Solution structure of the periplasmic signaling domain of HasR, a TonB-dependent outer membrane heme transporter== | | ==Solution structure of the periplasmic signaling domain of HasR, a TonB-dependent outer membrane heme transporter== |
- | <StructureSection load='2m5j' size='340' side='right' caption='[[2m5j]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2m5j' size='340' side='right'caption='[[2m5j]]' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2m5j]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_marcescens"_(bizio_1823)_trevisan_in_de_toni_and_trevisan_1889 "bacillus marcescens" (bizio 1823) trevisan in de toni and trevisan 1889]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2M5J OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2M5J FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2m5j]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Serratia_marcescens Serratia marcescens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2M5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2M5J FirstGlance]. <br> |
- | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3csl|3csl]], [[3csn|3csn]], [[3ddr|3ddr]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
- | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">hasR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=615 "Bacillus marcescens" (Bizio 1823) Trevisan in de Toni and Trevisan 1889])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2m5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2m5j OCA], [https://pdbe.org/2m5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2m5j RCSB], [https://www.ebi.ac.uk/pdbsum/2m5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2m5j ProSAT]</span></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2m5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2m5j OCA], [http://pdbe.org/2m5j PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2m5j RCSB], [http://www.ebi.ac.uk/pdbsum/2m5j PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2m5j ProSAT]</span></td></tr> | + | |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/Q79AD2_SERMA Q79AD2_SERMA] |
| <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Amorim, G Cardoso de]] | + | [[Category: Large Structures]] |
- | [[Category: Delepierre, M]] | + | [[Category: Serratia marcescens]] |
- | [[Category: Izadi-Pruneyre, N]] | + | [[Category: Cardoso de Amorim G]] |
- | [[Category: Malki, I]] | + | [[Category: Delepierre M]] |
- | [[Category: Prochnicka-Chalufour, A]] | + | [[Category: Izadi-Pruneyre N]] |
- | [[Category: Simenel, C]] | + | [[Category: Malki I]] |
- | [[Category: Signaling domain]]
| + | [[Category: Prochnicka-Chalufour A]] |
- | [[Category: Signaling protein]]
| + | [[Category: Simenel C]] |
- | [[Category: Tonb dependent transporter]]
| + | |
| Structural highlights
Function
Q79AD2_SERMA
Publication Abstract from PubMed
Bacteria use diverse signaling pathways to control gene expression in response to external stimuli. In Gram-negative bacteria, the binding of a nutrient is sensed by an outer membrane transporter. This signal is then transmitted to an antisigma factor and subsequently to the cytoplasm where an ECF sigma factor induces expression of genes related to the acquisition of this nutrient. The molecular interactions involved in this transmembrane signaling are poorly understood and structural data on this family of antisigma factor are rare. Here, we present the first structural study of the periplasmic domain of an antisigma factor and its interaction with the transporter. The study concerns the signaling in the heme acquisition system (Has) of Serratia marcescens. Our data support unprecedented partially disordered periplasmic domain of an anti-sigma factor HasS in contact with a membrane-mimicking environment. We solved the 3D structure of the signaling domain of HasR transporter and identified the residues at the HasS-HasR interface. Their conservation in several bacteria suggests wider significance of the proposed model for the understanding of bacterial transmembrane signaling.
Interaction of a Partially Disordered Antisigma Factor with Its Partner, the Signaling Domain of the TonB-Dependent Transporter HasR.,Malki I, Simenel C, Wojtowicz H, Cardoso de Amorim G, Prochnicka-Chalufour A, Hoos S, Raynal B, England P, Chaffotte A, Delepierre M, Delepelaire P, Izadi-Pruneyre N PLoS One. 2014 Apr 11;9(4):e89502. doi: 10.1371/journal.pone.0089502. eCollection, 2014. PMID:24727671[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Malki I, Simenel C, Wojtowicz H, Cardoso de Amorim G, Prochnicka-Chalufour A, Hoos S, Raynal B, England P, Chaffotte A, Delepierre M, Delepelaire P, Izadi-Pruneyre N. Interaction of a Partially Disordered Antisigma Factor with Its Partner, the Signaling Domain of the TonB-Dependent Transporter HasR. PLoS One. 2014 Apr 11;9(4):e89502. doi: 10.1371/journal.pone.0089502. eCollection, 2014. PMID:24727671 doi:http://dx.doi.org/10.1371/journal.pone.0089502
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