|
|
| (2 intermediate revisions not shown.) |
| Line 1: |
Line 1: |
| | | | |
| | ==Solution structure of a EF-hand domain from sea urchin polycystin-2== | | ==Solution structure of a EF-hand domain from sea urchin polycystin-2== |
| - | <StructureSection load='2mhh' size='340' side='right' caption='[[2mhh]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''> | + | <StructureSection load='2mhh' size='340' side='right'caption='[[2mhh]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[2mhh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Purple_sea_urchin Purple sea urchin]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MHH OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2MHH FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2mhh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Strongylocentrotus_purpuratus Strongylocentrotus purpuratus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2MHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2MHH FirstGlance]. <br> |
| - | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PKD2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=7668 Purple sea urchin])</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2mhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mhh OCA], [http://pdbe.org/2mhh PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2mhh RCSB], [http://www.ebi.ac.uk/pdbsum/2mhh PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2mhh ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2mhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2mhh OCA], [https://pdbe.org/2mhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2mhh RCSB], [https://www.ebi.ac.uk/pdbsum/2mhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2mhh ProSAT]</span></td></tr> |
| | </table> | | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/Q7Z2B5_STRPU Q7Z2B5_STRPU] |
| | <div style="background-color:#fffaf0;"> | | <div style="background-color:#fffaf0;"> |
| | == Publication Abstract from PubMed == | | == Publication Abstract from PubMed == |
| Line 20: |
Line 22: |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Purple sea urchin]] | + | [[Category: Large Structures]] |
| - | [[Category: Celic, A]] | + | [[Category: Strongylocentrotus purpuratus]] |
| - | [[Category: Corbin, R]] | + | [[Category: Celic A]] |
| - | [[Category: Ehrlich, B E]] | + | [[Category: Corbin R]] |
| - | [[Category: Hodsdon, M E]] | + | [[Category: Ehrlich BE]] |
| - | [[Category: Keeler, C]] | + | [[Category: Hodsdon ME]] |
| - | [[Category: Kuo, I Y]] | + | [[Category: Keeler C]] |
| - | [[Category: Petri, E T]] | + | [[Category: Kuo IY]] |
| - | [[Category: Channel]]
| + | [[Category: Petri ET]] |
| - | [[Category: Ef-hand]]
| + | |
| - | [[Category: Metal binding protein]]
| + | |
| Structural highlights
Function
Q7Z2B5_STRPU
Publication Abstract from PubMed
Polycystin 2 (PC2) is a calcium-dependent calcium channel, and mutations to human PC2 (hPC2) are associated with polycystic kidney disease. The C-terminal tail of hPC2 contains 2 EF hand motifs, but only the second binds calcium. Here, we investigate whether these EF hand motifs serve as a calcium sensor responsible for the calcium dependence of PC2 function. Using NMR and bioinformatics, we show that the overall fold is highly conserved, but in evolutionarily earlier species, both EF hands bind calcium. To test whether the EF hand motif is truly a calcium sensor controlling PC2 channel function, we altered the number of calcium binding sites in hPC2. NMR studies confirmed that modified hPC2 binds an additional calcium ion. Single-channel recordings demonstrated a leftward shift in the calcium dependence, and imaging studies in cells showed that calcium transients were enhanced compared with wild-type hPC2. However, biophysics and functional studies showed that the first EF hand can only bind calcium and be functionally active if the second (native) calcium-binding EF hand is intact. These results suggest that the number and location of calcium-binding sites in the EF hand senses the concentration of calcium required for PC2 channel activity and cellular function.
The number and location of EF hand motifs dictates the calcium dependence of polycystin-2 function.,Kuo IY, Keeler C, Corbin R, Celic A, Petri ET, Hodsdon ME, Ehrlich BE FASEB J. 2014 May;28(5):2332-46. doi: 10.1096/fj.13-247106. Epub 2014 Feb 20. PMID:24558196[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Kuo IY, Keeler C, Corbin R, Celic A, Petri ET, Hodsdon ME, Ehrlich BE. The number and location of EF hand motifs dictates the calcium dependence of polycystin-2 function. FASEB J. 2014 May;28(5):2332-46. doi: 10.1096/fj.13-247106. Epub 2014 Feb 20. PMID:24558196 doi:http://dx.doi.org/10.1096/fj.13-247106
|
