6h9v

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(New page: '''Unreleased structure''' The entry 6h9v is ON HOLD Authors: Description: Category: Unreleased Structures)
Current revision (06:56, 3 April 2019) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6h9v is ON HOLD
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==Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc==
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<StructureSection load='6h9v' size='340' side='right'caption='[[6h9v]], [[Resolution|resolution]] 1.52&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6h9v]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6H9V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6H9V FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MFU:ALPHA-L-METHYL-FUCOSE'>MFU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=IAS:BETA-L-ASPARTIC+ACID'>IAS</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4oo6|4oo6]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6h9v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6h9v OCA], [http://pdbe.org/6h9v PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6h9v RCSB], [http://www.ebi.ac.uk/pdbsum/6h9v PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6h9v ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Attachment of human noroviruses to histo blood group antigens (HBGAs) is essential for infection, but how this binding event promotes the infection of host cells is unknown. Here, we employ protein NMR experiments supported by mass spectrometry and crystallography to study HBGA binding to the P-domain of a prevalent virus strain (GII.4). We report a highly selective transformation of asparagine 373, located in an antigenic loop adjoining the HBGA binding site, into an iso-aspartate residue. This spontaneous post-translational modification (PTM) proceeds with an estimated half-life of a few days at physiological temperatures, independent of the presence of HBGAs but dramatically affecting HBGA recognition. Sequence conservation and the surface-exposed position of this PTM suggest an important role in infection and immune recognition for many norovirus strains.
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Authors:
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A post-translational modification of human Norovirus capsid protein attenuates glycan binding.,Mallagaray A, Creutznacher R, Dulfer J, Mayer PHO, Grimm LL, Orduna JM, Trabjerg E, Stehle T, Rand KD, Blaum BS, Uetrecht C, Peters T Nat Commun. 2019 Mar 21;10(1):1320. doi: 10.1038/s41467-019-09251-5. PMID:30899001<ref>PMID:30899001</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 6h9v" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Blaum, B S]]
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[[Category: Meyer, P H.O]]
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[[Category: Fucose]]
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[[Category: Glycan]]
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[[Category: Isoaspartate]]
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[[Category: Isopeptide]]
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[[Category: Protruding domain]]
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[[Category: Receptor]]
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[[Category: Viral capsid protein]]
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[[Category: Viral protein]]

Current revision

Crystal structure of deaminated P domain from norovirus strain Saga GII-4 in complex with Fuc

PDB ID 6h9v

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