6gff

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:41, 6 November 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6gff is ON HOLD until Paper Publication
+
==Structure of GARP (LRRC32) in complex with latent TGF-beta1 and MHG-8 Fab==
 +
<StructureSection load='6gff' size='340' side='right'caption='[[6gff]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6gff]] is a 14 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6GFF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6GFF FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.1&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6gff FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6gff OCA], [https://pdbe.org/6gff PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6gff RCSB], [https://www.ebi.ac.uk/pdbsum/6gff PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6gff ProSAT]</span></td></tr>
 +
</table>
 +
== Disease ==
 +
[https://www.uniprot.org/uniprot/TGFB1_HUMAN TGFB1_HUMAN] Defects in TGFB1 are the cause of Camurati-Engelmann disease (CE) [MIM:[https://omim.org/entry/131300 131300]; also known as progressive diaphyseal dysplasia 1 (DPD1). CE is an autosomal dominant disorder characterized by hyperostosis and sclerosis of the diaphyses of long bones. The disease typically presents in early childhood with pain, muscular weakness and waddling gait, and in some cases other features such as exophthalmos, facial paralysis, hearing difficulties and loss of vision.<ref>PMID:10973241</ref> <ref>PMID:11062463</ref> <ref>PMID:12493741</ref> <ref>PMID:12843182</ref> <ref>PMID:15103729</ref>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/TGFB1_HUMAN TGFB1_HUMAN] Multifunctional protein that controls proliferation, differentiation and other functions in many cell types. Many cells synthesize TGFB1 and have specific receptors for it. It positively and negatively regulates many other growth factors. It plays an important role in bone remodeling as it is a potent stimulator of osteoblastic bone formation, causing chemotaxis, proliferation and differentiation in committed osteoblasts.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Transforming growth factor-beta1 (TGF-beta1) is one of very few cytokines produced in a latent form, requiring activation to exert any of its vastly diverse effects on development, immunity, and cancer. Regulatory T cells (Tregs) suppress immune cells within close proximity by activating latent TGF-beta1 presented by GARP to integrin alphaVbeta8 on their surface. We solved the crystal structure of GARP:latent TGF-beta1 bound to an antibody that stabilizes the complex and blocks release of active TGF-beta1. This reveals how GARP exploits an unusual medley of interactions, including fold complementation by the N terminus of TGF-beta1, to chaperone and orient the cytokine for binding and activation by alphaVbeta8. Thus, this work further elucidates the mechanism of antibody-mediated blockade of TGF-beta1 activation and immunosuppression by Tregs.
-
Authors:
+
Structural basis of latent TGF-beta1 presentation and activation by GARP on human regulatory T cells.,Lienart S, Merceron R, Vanderaa C, Lambert F, Colau D, Stockis J, van der Woning B, De Haard H, Saunders M, Coulie PG, Savvides SN, Lucas S Science. 2018 Oct 25. pii: science.aau2909. doi: 10.1126/science.aau2909. PMID:30361387<ref>PMID:30361387</ref>
-
Description:
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
 +
<div class="pdbe-citations 6gff" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[Antibody 3D structures|Antibody 3D structures]]
 +
*[[P53 3D structures|P53 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Mus musculus]]
 +
[[Category: Colau D]]
 +
[[Category: Coulie PG]]
 +
[[Category: De Haard H]]
 +
[[Category: Lienart S]]
 +
[[Category: Lucas S]]
 +
[[Category: Merceron R]]
 +
[[Category: Saunders M]]
 +
[[Category: Savvides SN]]
 +
[[Category: Stockis J]]
 +
[[Category: Van Der Woning B]]
 +
[[Category: Vanderaa C]]

Current revision

Structure of GARP (LRRC32) in complex with latent TGF-beta1 and MHG-8 Fab

PDB ID 6gff

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools