6hc8
From Proteopedia
(Difference between revisions)
m (Protected "6hc8" [edit=sysop:move=sysop]) |
|||
Line 1: | Line 1: | ||
- | '''Unreleased structure''' | ||
- | + | ==Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPA1 (313-339)== | |
- | + | <StructureSection load='6hc8' size='340' side='right'caption='[[6hc8]], [[Resolution|resolution]] 1.90Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[6hc8]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HC8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6HC8 FirstGlance]. <br> | |
- | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=OGA:N-OXALYLGLYCINE'>OGA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | |
- | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6hc8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hc8 OCA], [http://pdbe.org/6hc8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6hc8 RCSB], [http://www.ebi.ac.uk/pdbsum/6hc8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6hc8 ProSAT]</span></td></tr> |
- | [[Category: Clifton, I | + | </table> |
+ | == Disease == | ||
+ | [[http://www.uniprot.org/uniprot/TRPA1_HUMAN TRPA1_HUMAN]] Familial episodic pain syndrome with predominantly upper body involvement. The disease is caused by mutations affecting the gene represented in this entry. | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/HIF1N_HUMAN HIF1N_HUMAN]] Hydroxylates HIF-1 alpha at 'Asp-803' in the C-terminal transactivation domain (CAD). Functions as an oxygen sensor and, under normoxic conditions, the hydroxylation prevents interaction of HIF-1 with transcriptional coactivators including Cbp/p300-interacting transactivator. Involved in transcriptional repression through interaction with HIF1A, VHL and histone deacetylases. Hydroxylates specific Asn residues within ankyrin repeat domains (ARD) of NFKB1, NFKBIA, NOTCH1, ASB4, PPP1R12A and several other ARD-containing proteins. Also hydroxylates Asp and His residues within ARDs of ANK1 and TNKS2, respectively. Negatively regulates NOTCH1 activity, accelerating myogenic differentiation. Positively regulates ASB4 activity, promoting vascular differentiation.<ref>PMID:12080085</ref> <ref>PMID:12042299</ref> <ref>PMID:17003112</ref> <ref>PMID:18299578</ref> <ref>PMID:19245366</ref> <ref>PMID:17573339</ref> <ref>PMID:21251231</ref> <ref>PMID:21177872</ref> [[http://www.uniprot.org/uniprot/TRPA1_HUMAN TRPA1_HUMAN]] Receptor-activated non-selective cation channel involved in detection of pain and possibly also in cold perception and inner ear function (PubMed:25389312, PubMed:25855297). Has a central role in the pain response to endogenous inflammatory mediators and to a diverse array of volatile irritants, such as mustard oil, cinnamaldehyde, garlic and acrolein, an irritant from tears gas and vehicule exhaust fumes (PubMed:25389312, PubMed:20547126). Is also activated by menthol (in vitro)(PubMed:25389312). Acts also as an ionotropic cannabinoid receptor by being activated by delta(9)-tetrahydrocannabinol (THC), the psychoactive component of marijuana (PubMed:25389312). May be a component for the mechanosensitive transduction channel of hair cells in inner ear, thereby participating in the perception of sounds. Probably operated by a phosphatidylinositol second messenger system (By similarity).[UniProtKB:Q8BLA8]<ref>PMID:20547126</ref> <ref>PMID:25389312</ref> <ref>PMID:25855297</ref> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Clifton, I J]] | ||
+ | [[Category: Hopkinson, R J]] | ||
+ | [[Category: Leissing, T M]] | ||
[[Category: Lu, X]] | [[Category: Lu, X]] | ||
- | [[Category: Saward, B | + | [[Category: Saward, B G]] |
- | [[Category: | + | [[Category: Schofield, C J]] |
- | [[Category: | + | [[Category: Activator-inhibitor]] |
- | [[Category: | + | [[Category: Ard]] |
+ | [[Category: Asparaginyl/aspartyl hydroxylase]] | ||
+ | [[Category: Beta-hydroxylation]] | ||
+ | [[Category: Channel]] | ||
+ | [[Category: Dioxygenase]] | ||
+ | [[Category: Dsbh]] | ||
+ | [[Category: Facial triad]] | ||
+ | [[Category: Gene regulation]] | ||
+ | [[Category: Ion channel]] | ||
+ | [[Category: Membrane protein]] | ||
+ | [[Category: Metal-binding]] | ||
+ | [[Category: Non-heme]] | ||
+ | [[Category: Oxidoreductase ankyrin]] | ||
+ | [[Category: Oxidoreductase-peptide complex]] | ||
+ | [[Category: Oxygenase]] | ||
+ | [[Category: Protein binding]] | ||
+ | [[Category: Signaling]] | ||
+ | [[Category: Transcription]] | ||
+ | [[Category: Trpa channel]] |
Current revision
Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPA1 (313-339)
|
Categories: Large Structures | Clifton, I J | Hopkinson, R J | Leissing, T M | Lu, X | Saward, B G | Schofield, C J | Activator-inhibitor | Ard | Asparaginyl/aspartyl hydroxylase | Beta-hydroxylation | Channel | Dioxygenase | Dsbh | Facial triad | Gene regulation | Ion channel | Membrane protein | Metal-binding | Non-heme | Oxidoreductase ankyrin | Oxidoreductase-peptide complex | Oxygenase | Protein binding | Signaling | Transcription | Trpa channel