2p7n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:18, 17 June 2021) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2p7n.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.==
-
|PDB= 2p7n |SIZE=350|CAPTION= <scene name='initialview01'>2p7n</scene>, resolution 2.800&Aring;
+
<StructureSection load='2p7n' size='340' side='right'caption='[[2p7n]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2p7n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"chromobacterium_janthinum"_(zopf)_ford_1927 "chromobacterium janthinum" (zopf) ford 1927]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P7N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P7N FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|GENE= sipD, CV_2617 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 Chromobacterium violaceum])
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[2jaa|2jaa]]</div></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam06511 IpaD]</span>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sipD, CV_2617 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 "Chromobacterium janthinum" (Zopf) Ford 1927])</td></tr>
-
|RELATEDENTRY=[[2jaa|2JAA]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p7n OCA], [https://pdbe.org/2p7n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p7n RCSB], [https://www.ebi.ac.uk/pdbsum/2p7n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p7n ProSAT], [https://www.topsan.org/Proteins/NESGC/2p7n TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2p7n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p7n OCA], [http://www.ebi.ac.uk/pdbsum/2p7n PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2p7n RCSB]</span>
+
</table>
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p7/2p7n_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2P7N is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P7N OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Chromobacterium violaceum]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p7n ConSurf].
-
[[Category: Abashidze, M.]]
+
<div style="clear:both"></div>
-
[[Category: Acton, T B.]]
+
__TOC__
-
[[Category: Baran, M C.]]
+
</StructureSection>
-
[[Category: Benach, J.]]
+
[[Category: Large Structures]]
-
[[Category: Cunningham, K.]]
+
[[Category: Abashidze, M]]
-
[[Category: Hunt, J F.]]
+
[[Category: Acton, T B]]
-
[[Category: Janjua, H.]]
+
[[Category: Baran, M C]]
-
[[Category: Liu, J.]]
+
[[Category: Benach, J]]
-
[[Category: Ma, L C.]]
+
[[Category: Cunningham, K]]
-
[[Category: Montelione, G T.]]
+
[[Category: Hunt, J F]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Janjua, H]]
-
[[Category: Rost, B.]]
+
[[Category: Liu, J]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Ma, L C]]
-
[[Category: Tong, L.]]
+
[[Category: Montelione, G T]]
-
[[Category: Xiao, R.]]
+
[[Category: Structural genomic]]
-
[[Category: Zhao, L.]]
+
[[Category: Rost, B]]
-
[[Category: cvr69]]
+
[[Category: Seetharaman, J]]
-
[[Category: nesg]]
+
[[Category: Tong, L]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Xiao, R]]
-
[[Category: pathogenicity island 1 effector protein]]
+
[[Category: Zhao, L]]
-
[[Category: protein structure initiative]]
+
[[Category: Cell invasion]]
-
[[Category: psi-2]]
+
[[Category: Cvr69]]
-
[[Category: structural genomic]]
+
[[Category: Nesg]]
-
 
+
[[Category: Pathogenicity island 1 effector protein]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:31:36 2008''
+
[[Category: PSI, Protein structure initiative]]

Current revision

Crystal structure of the Pathogenicity island 1 effector protein from Chromobacterium violaceum. Northeast Structural Genomics Consortium (NESGC) target CvR69.

PDB ID 2p7n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2p7n"
Personal tools