2pgv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:09, 21 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pgv.jpg|left|200px]]
 
-
{{Structure
+
==GTB C209A==
-
|PDB= 2pgv |SIZE=350|CAPTION= <scene name='initialview01'>2pgv</scene>, resolution 1.79&Aring;
+
<StructureSection load='2pgv' size='340' side='right'caption='[[2pgv]], [[Resolution|resolution]] 1.79&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene>
+
<table><tr><td colspan='2'>[[2pgv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PGV FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Fucosylgalactoside_3-alpha-galactosyltransferase Fucosylgalactoside 3-alpha-galactosyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.1.37 2.4.1.37] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.79&#8491;</td></tr>
-
|GENE= ABO ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pgv OCA], [https://pdbe.org/2pgv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pgv RCSB], [https://www.ebi.ac.uk/pdbsum/2pgv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pgv ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[2pgy|2PGY]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pgv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pgv OCA], [http://www.ebi.ac.uk/pdbsum/2pgv PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pgv RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/BGAT_HUMAN BGAT_HUMAN] This protein is the basis of the ABO blood group system. The histo-blood group ABO involves three carbohydrate antigens: A, B, and H. A, B, and AB individuals express a glycosyltransferase activity that converts the H antigen to the A antigen (by addition of UDP-GalNAc) or to the B antigen (by addition of UDP-Gal), whereas O individuals lack such activity.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pg/2pgv_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pgv ConSurf].
 +
<div style="clear:both"></div>
-
'''GTB C209A'''
+
==See Also==
-
 
+
*[[Glycosyltransferase 3D structures|Glycosyltransferase 3D structures]]
-
 
+
__TOC__
-
==Disease==
+
</StructureSection>
-
Known disease associated with this structure: Blood group, ABO system OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=110300 110300]]
+
-
 
+
-
==About this Structure==
+
-
2PGV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PGV OCA].
+
-
[[Category: Fucosylgalactoside 3-alpha-galactosyltransferase]]
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Letts, J A.]]
+
[[Category: Letts JA]]
-
[[Category: Schuman, B.]]
+
[[Category: Schuman B]]
-
[[Category: abo(h)]]
+
-
[[Category: blood group]]
+
-
[[Category: c209a]]
+
-
[[Category: glycosyltransferase]]
+
-
[[Category: gtb]]
+
-
[[Category: h-antigen]]
+
-
[[Category: rossmann fold]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:35:46 2008''
+

Current revision

GTB C209A

PDB ID 2pgv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools