2qf8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (01:21, 21 November 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 1: Line 1:
==Crystal structure of the complex of Buffalo Secretory Glycoprotein with tetrasaccharide at 2.8A resolution==
==Crystal structure of the complex of Buffalo Secretory Glycoprotein with tetrasaccharide at 2.8A resolution==
-
<StructureSection load='2qf8' size='340' side='right' caption='[[2qf8]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
+
<StructureSection load='2qf8' size='340' side='right'caption='[[2qf8]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2qf8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QF8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2QF8 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2qf8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QF8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QF8 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2o9o|2o9o]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qf8 OCA], [http://pdbe.org/2qf8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2qf8 RCSB], [http://www.ebi.ac.uk/pdbsum/2qf8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2qf8 ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qf8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qf8 OCA], [https://pdbe.org/2qf8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qf8 RCSB], [https://www.ebi.ac.uk/pdbsum/2qf8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qf8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/CH3L1_BUBBU CH3L1_BUBBU]] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).
+
[https://www.uniprot.org/uniprot/CH3L1_BUBBU CH3L1_BUBBU] Carbohydrate-binding lectin with a preference for chitin. May play a role in defense against pathogens, or in tissue remodeling. May play an important role in the capacity of cells to respond to and cope with changes in their environment (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 15: Line 15:
<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qf/2qf8_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qf/2qf8_consurf.spt"</scriptWhenChecked>
-
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
Line 22: Line 22:
==See Also==
==See Also==
-
*[[Chitinase-3-like protein|Chitinase-3-like protein]]
+
*[[Chitinase-3-like protein 3D structures|Chitinase-3-like protein 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bubalus bubalis]]
[[Category: Bubalus bubalis]]
-
[[Category: Jain, R]]
+
[[Category: Large Structures]]
-
[[Category: Kaur, P]]
+
[[Category: Jain R]]
-
[[Category: Kumar, A]]
+
[[Category: Kaur P]]
-
[[Category: Sharma, S]]
+
[[Category: Kumar A]]
-
[[Category: Singh, A K]]
+
[[Category: Sharma S]]
-
[[Category: Singh, N]]
+
[[Category: Singh AK]]
-
[[Category: Singh, T P]]
+
[[Category: Singh N]]
-
[[Category: Sinha, M]]
+
[[Category: Singh TP]]
-
[[Category: Buffalo]]
+
[[Category: Sinha M]]
-
[[Category: Complex]]
+
-
[[Category: Glycoprotein]]
+
-
[[Category: Secretory]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Tetrasaccharide]]
+

Current revision

Crystal structure of the complex of Buffalo Secretory Glycoprotein with tetrasaccharide at 2.8A resolution

PDB ID 2qf8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qf8"
Personal tools