This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2plg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:26, 17 June 2021) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2plg.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of T110839 protein from Synechococcus elongatus==
-
|PDB= 2plg |SIZE=350|CAPTION= <scene name='initialview01'>2plg</scene>, resolution 2.60&Aring;
+
<StructureSection load='2plg' size='340' side='right'caption='[[2plg]]' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PLG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PLG FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2plg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2plg OCA], [https://pdbe.org/2plg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2plg RCSB], [https://www.ebi.ac.uk/pdbsum/2plg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2plg ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2plg TOPSAN]</span></td></tr>
-
|GENE= tll0839 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=32046 Synechococcus elongatus])
+
</table>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam08851 DUF1821]</span>
+
== Evolutionary Conservation ==
-
|RELATEDENTRY=
+
[[Image:Consurf_key_small.gif|200px|right]]
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2plg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2plg OCA], [http://www.ebi.ac.uk/pdbsum/2plg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2plg RCSB]</span>
+
Check<jmol>
-
}}
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pl/2plg_consurf.spt"</scriptWhenChecked>
-
'''Crystal structure of T110839 protein from Synechococcus elongatus'''
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2plg ConSurf].
-
2PLG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PLG OCA].
+
<div style="clear:both"></div>
-
[[Category: Single protein]]
+
__TOC__
-
[[Category: Synechococcus elongatus]]
+
</StructureSection>
-
[[Category: Burley, S K.]]
+
[[Category: Large Structures]]
-
[[Category: Eswaramoorthy, S.]]
+
[[Category: Burley SK]]
-
[[Category: Madegowda, M.]]
+
[[Category: Eswaramoorthy S]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Madegowda M]]
-
[[Category: Swaminathan, S.]]
+
[[Category: Swaminathan S]]
-
[[Category: 10450c]]
+
-
[[Category: duf1821]]
+
-
[[Category: hypothetical]]
+
-
[[Category: new york structural genomix research consortium]]
+
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: uncharacterized]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:37:34 2008''
+

Current revision

Crystal structure of T110839 protein from Synechococcus elongatus

PDB ID 2plg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools