6g3q

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Current revision (20:31, 2 December 2018) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 6g3q is ON HOLD until Paper Publication
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==Crystal structure of human carbonic anhydrase II in complex with the inhibitor famotidine==
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<StructureSection load='6g3q' size='340' side='right' caption='[[6g3q]], [[Resolution|resolution]] 1.01&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[6g3q]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G3Q OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G3Q FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FO9:famotidine'>FO9</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Carbonate_dehydratase Carbonate dehydratase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.1.1 4.2.1.1] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g3q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g3q OCA], [http://pdbe.org/6g3q PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g3q RCSB], [http://www.ebi.ac.uk/pdbsum/6g3q PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g3q ProSAT]</span></td></tr>
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</table>
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== Disease ==
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[[http://www.uniprot.org/uniprot/CAH2_HUMAN CAH2_HUMAN]] Defects in CA2 are the cause of osteopetrosis autosomal recessive type 3 (OPTB3) [MIM:[http://omim.org/entry/259730 259730]]; also known as osteopetrosis with renal tubular acidosis, carbonic anhydrase II deficiency syndrome, Guibaud-Vainsel syndrome or marble brain disease. Osteopetrosis is a rare genetic disease characterized by abnormally dense bone, due to defective resorption of immature bone. The disorder occurs in two forms: a severe autosomal recessive form occurring in utero, infancy, or childhood, and a benign autosomal dominant form occurring in adolescence or adulthood. Autosomal recessive osteopetrosis is usually associated with normal or elevated amount of non-functional osteoclasts. OPTB3 is associated with renal tubular acidosis, cerebral calcification (marble brain disease) and in some cases with mental retardation.<ref>PMID:1928091</ref> <ref>PMID:1542674</ref> <ref>PMID:8834238</ref> <ref>PMID:9143915</ref> <ref>PMID:15300855</ref>
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== Function ==
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[[http://www.uniprot.org/uniprot/CAH2_HUMAN CAH2_HUMAN]] Essential for bone resorption and osteoclast differentiation (By similarity). Reversible hydration of carbon dioxide. Can hydrate cyanamide to urea. Involved in the regulation of fluid secretion into the anterior chamber of the eye.<ref>PMID:10550681</ref> <ref>PMID:11831900</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Famotidine, an antiulcer drug incorporating a sulfamide motif, was investigated as carbonic anhydrase inhibitor (CAI). It acts as a nanomolar inhibitor of several human (hCA II, VI, VII and XII) and Helicobacter pylori CAs. The high resolution X-ray structures of famotidine bound to hCA I and II revealed interesting aspects related to its CA inhibition mechanism, offering the possibility to develop antibacterials with a novel mechanism of action.
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Authors: Ferraroni, M., Supuran, C.T., Angeli, A.
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Famotidine, an Antiulcer Agent, Strongly Inhibits Helicobacter pylori and Human Carbonic Anhydrases.,Angeli A, Ferraroni M, Supuran CT ACS Med Chem Lett. 2018 Sep 4;9(10):1035-1038. doi:, 10.1021/acsmedchemlett.8b00334. eCollection 2018 Oct 11. PMID:30344913<ref>PMID:30344913</ref>
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Description: Crystal structure of human carbonic anhydrase II in complex with the inhibitor famotidine
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Supuran, C.T]]
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<div class="pdbe-citations 6g3q" style="background-color:#fffaf0;"></div>
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[[Category: Ferraroni, M]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Carbonate dehydratase]]
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[[Category: Homo sapiens]]
[[Category: Angeli, A]]
[[Category: Angeli, A]]
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[[Category: Ferraroni, M]]
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[[Category: Supuran, C T]]
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[[Category: Lyase]]

Current revision

Crystal structure of human carbonic anhydrase II in complex with the inhibitor famotidine

6g3q, resolution 1.01Å

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