2pw6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:30, 30 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pw6.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of uncharacterized protein JW3007 from Escherichia coli K12==
-
|PDB= 2pw6 |SIZE=350|CAPTION= <scene name='initialview01'>2pw6</scene>, resolution 2.27&Aring;
+
<StructureSection load='2pw6' size='340' side='right'caption='[[2pw6]], [[Resolution|resolution]] 2.27&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
<table><tr><td colspan='2'>[[2pw6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PW6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PW6 FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.27&#8491;</td></tr>
-
|GENE= ygiD, b3039, JW3007 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK10628 PRK10628]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pw6 OCA], [https://pdbe.org/2pw6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pw6 RCSB], [https://www.ebi.ac.uk/pdbsum/2pw6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pw6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2pw6 TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pw6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pw6 OCA], [http://www.ebi.ac.uk/pdbsum/2pw6 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pw6 RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/YGID_ECOLI YGID_ECOLI]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of uncharacterized protein JW3007 from Escherichia coli K12'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pw6_consurf.spt"</scriptWhenChecked>
-
2PW6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PW6 OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Escherichia coli]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Chen, L.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pw6 ConSurf].
-
[[Category: Ebihara, A.]]
+
<div style="clear:both"></div>
-
[[Category: Kuramitsu, S.]]
+
__TOC__
-
[[Category: Li, Y.]]
+
</StructureSection>
-
[[Category: Liu, Z J.]]
+
[[Category: Escherichia coli K-12]]
-
[[Category: Newton, M G.]]
+
[[Category: Large Structures]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Chen L]]
-
[[Category: Rose, J P.]]
+
[[Category: Ebihara A]]
-
[[Category: Ruble, J.]]
+
[[Category: Kuramitsu S]]
-
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
+
[[Category: Li Y]]
-
[[Category: Shinkai, A.]]
+
[[Category: Liu ZJ]]
-
[[Category: Takagi, Y.]]
+
[[Category: Newton MG]]
-
[[Category: Wang, B-C.]]
+
[[Category: Rose JP]]
-
[[Category: Yokayama, S.]]
+
[[Category: Ruble J]]
-
[[Category: Zhu, J.]]
+
[[Category: Shinkai A]]
-
[[Category: escherichia coli structural genomic]]
+
[[Category: Takagi Y]]
-
[[Category: jw3007]]
+
[[Category: Wang B-C]]
-
[[Category: protein structure]]
+
[[Category: Yokayama S]]
-
[[Category: protein structure initiative]]
+
[[Category: Zhu J]]
-
[[Category: riken and psi]]
+
-
[[Category: riken structural genomics/proteomics initiative]]
+
-
[[Category: rsgi]]
+
-
[[Category: secsg]]
+
-
[[Category: southeast collaboratory for structural genomic]]
+
-
[[Category: uncharacterized protein]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:41:32 2008''
+

Current revision

Crystal structure of uncharacterized protein JW3007 from Escherichia coli K12

PDB ID 2pw6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pw6"
Personal tools