2pwp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:10, 30 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2pwp.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine==
-
|PDB= 2pwp |SIZE=350|CAPTION= <scene name='initialview01'>2pwp</scene>, resolution 2.1&Aring;
+
<StructureSection load='2pwp' size='340' side='right'caption='[[2pwp]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene>
+
<table><tr><td colspan='2'>[[2pwp]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PWP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PWP FirstGlance]. <br>
-
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Spermidine_synthase Spermidine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.16 2.5.1.16] </span>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
|GENE= PF11_0301 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=36329 Plasmodium falciparum 3D7])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=SPD:SPERMIDINE'>SPD</scene></td></tr>
-
|DOMAIN=
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pwp OCA], [https://pdbe.org/2pwp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pwp RCSB], [https://www.ebi.ac.uk/pdbsum/2pwp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pwp ProSAT]</span></td></tr>
-
|RELATEDENTRY=[[2hte|2HTE]], [[2i7c|2I7C]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pwp OCA], [http://www.ebi.ac.uk/pdbsum/2pwp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2pwp RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q8II73_PLAF7 Q8II73_PLAF7]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pw/2pwp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pwp ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine'''
+
==See Also==
-
 
+
*[[Spermidine synthase 3D structures|Spermidine synthase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2PWP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum_3d7 Plasmodium falciparum 3d7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PWP OCA].
+
[[Category: Large Structures]]
-
[[Category: Plasmodium falciparum 3d7]]
+
[[Category: Plasmodium falciparum 3D7]]
-
[[Category: Single protein]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Spermidine synthase]]
+
[[Category: Bochkarev A]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Dong A]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Edwards AM]]
-
[[Category: Dong, A.]]
+
[[Category: Hui R]]
-
[[Category: Edwards, A M.]]
+
[[Category: Kozieradzki I]]
-
[[Category: Hui, R.]]
+
[[Category: Lew J]]
-
[[Category: Kozieradzki, I.]]
+
[[Category: Plotnikov AN]]
-
[[Category: Lew, J.]]
+
[[Category: Qiu W]]
-
[[Category: Plotnikov, A N.]]
+
[[Category: Ren H]]
-
[[Category: Qiu, W.]]
+
[[Category: Schapira M]]
-
[[Category: Ren, H.]]
+
[[Category: Sundstrom M]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Vedadi M]]
-
[[Category: Schapira, M.]]
+
[[Category: Wasney G]]
-
[[Category: Sundstrom, M.]]
+
[[Category: Weigelt J]]
-
[[Category: Vedadi, M.]]
+
[[Category: Wu H]]
-
[[Category: Wasney, G.]]
+
[[Category: Zhao Y]]
-
[[Category: Weigelt, J.]]
+
-
[[Category: Wu, H.]]
+
-
[[Category: Zhao, Y.]]
+
-
[[Category: sgc]]
+
-
[[Category: spermidine]]
+
-
[[Category: spermidine synthase]]
+
-
[[Category: structural genomics consortium]]
+
-
[[Category: transferase]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:41:41 2008''
+

Current revision

Crystal structure of spermidine synthase from Plasmodium falciparum in complex with spermidine

PDB ID 2pwp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2pwp"
Personal tools