2vad

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==Monomeric red fluorescent protein, DsRed.M1==
==Monomeric red fluorescent protein, DsRed.M1==
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<StructureSection load='2vad' size='340' side='right' caption='[[2vad]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
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<StructureSection load='2vad' size='340' side='right'caption='[[2vad]], [[Resolution|resolution]] 1.59&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[2vad]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Dissp Dissp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VAD OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VAD FirstGlance]. <br>
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<table><tr><td colspan='2'>[[2vad]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Discosoma_sp. Discosoma sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VAD FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.59&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CRQ:[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC+ACID'>CRQ</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CRQ:[2-(3-CARBAMOYL-1-IMINO-PROPYL)-4-(4-HYDROXY-BENZYLIDENE)-5-OXO-4,5-DIHYDRO-IMIDAZOL-1-YL]-ACETIC+ACID'>CRQ</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vae|2vae]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vad OCA], [https://pdbe.org/2vad PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vad RCSB], [https://www.ebi.ac.uk/pdbsum/2vad PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vad ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vad OCA], [http://pdbe.org/2vad PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2vad RCSB], [http://www.ebi.ac.uk/pdbsum/2vad PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2vad ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/RFP_DISSP RFP_DISSP] Thought to play a role in photoprotection of the coral's resident symbiont microalgae's photosystems from photoinhibition caused by high light levels found near the surface of coral reefs. In deeper water, the fluorescence may be to convert blue light into longer wavelengths more suitable for use in photosynthesis by the microalgal symbionts.<ref>PMID:10504696</ref>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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<jmolCheckbox>
<jmolCheckbox>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/2vad_consurf.spt"</scriptWhenChecked>
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/va/2vad_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
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==See Also==
==See Also==
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*[[Green Fluorescent Protein|Green Fluorescent Protein]]
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*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Dissp]]
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[[Category: Discosoma sp]]
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[[Category: Bevis, B]]
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[[Category: Large Structures]]
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[[Category: Downing, M E]]
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[[Category: Bevis B]]
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[[Category: Glick, B S]]
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[[Category: Downing ME]]
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[[Category: Keenan, R J]]
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[[Category: Glick BS]]
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[[Category: Khuong, N]]
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[[Category: Keenan RJ]]
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[[Category: Strack, R L]]
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[[Category: Khuong N]]
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[[Category: Strongin, D E]]
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[[Category: Strack RL]]
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[[Category: Sundaram, K]]
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[[Category: Strongin DE]]
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[[Category: Chromophore]]
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[[Category: Sundaram K]]
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[[Category: Dsred]]
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[[Category: Fluorescent protein]]
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[[Category: Gfp-like]]
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[[Category: Luminescence]]
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[[Category: Monomeric]]
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[[Category: Photoprotein]]
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Current revision

Monomeric red fluorescent protein, DsRed.M1

PDB ID 2vad

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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