6iej
From Proteopedia
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(New page: '''Unreleased structure''' The entry 6iej is ON HOLD Authors: Description: Category: Unreleased Structures) |
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- | '''Unreleased structure''' | ||
- | The | + | ==The C2 domain of cytosolic phospholipase A2 alpha bound to phosphatidylcholine== |
+ | <StructureSection load='6iej' size='340' side='right'caption='[[6iej]], [[Resolution|resolution]] 2.21Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6iej]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6IEJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6IEJ FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.206Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=HXG:1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>HXG</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6iej FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6iej OCA], [https://pdbe.org/6iej PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6iej RCSB], [https://www.ebi.ac.uk/pdbsum/6iej PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6iej ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/PA24A_CHICK PA24A_CHICK] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Ca(2+)-stimulated translocation of cytosolic phospholipase A2alpha (cPLA2alpha) to the Golgi induces arachidonic acid production, the rate-limiting step in pro-inflammatory eicosanoid synthesis. Structural insights into the cPLA2alpha preference for phosphatidylcholine (PC)-enriched membranes have remained elusive. Here, we report cPLA2alpha C2-domain structure (2.2A resolution) containing bound 1,2-dihexanoyl-sn-glycero-3-phosphocholine (DHPC) and Ca(2+) ions. Two Ca(2+) are complexed at locations previously reported for lipid-free C2-domain. One of these Ca(2+) along with a third Ca(2+) bridge the C2-domain to the DHPC phosphate group, which also interacts with Asn65. Tyr96 plays a key role in lipid headgroup recognition via cation-pi interaction with the PC trimethylammonium group. Mutagenesis analyses confirm Tyr96 and Asn65 function in PC binding selectivity by C2-domain and regulation of cPLA2alpha activity. The differing DHPC-binding mode of cPLA2alpha C2-domain, compared to phosphatidylserine or phosphatidylinositol 4,5-bisphosphate binding by other C2-domains, expands and deepens knowledge of lipid-binding mechanisms mediated by C2-domains. | ||
- | + | Structural basis of phosphatidylcholine recognition by the C2-domain of cytosolic phospholipase A2alpha.,Hirano Y, Gao YG, Stephenson DJ, Vu NT, Malinina L, Simanshu DK, Chalfant CE, Patel DJ, Brown RE Elife. 2019 May 3;8. pii: 44760. doi: 10.7554/eLife.44760. PMID:31050338<ref>PMID:31050338</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
+ | <div class="pdbe-citations 6iej" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Phospholipase A2 3D structures|Phospholipase A2 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Gallus gallus]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Brown RE]] | ||
+ | [[Category: Chalfant CE]] | ||
+ | [[Category: Gao YG]] | ||
+ | [[Category: Hirano Y]] | ||
+ | [[Category: Malinina L]] | ||
+ | [[Category: Patel DJ]] | ||
+ | [[Category: Stephenson DJ]] | ||
+ | [[Category: Vu NT]] |
Current revision
The C2 domain of cytosolic phospholipase A2 alpha bound to phosphatidylcholine
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Categories: Gallus gallus | Large Structures | Brown RE | Chalfant CE | Gao YG | Hirano Y | Malinina L | Patel DJ | Stephenson DJ | Vu NT