6hni
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 6hni is ON HOLD until Paper Publication Authors: Bradshaw, W.J., Kovacs-Simon, A., Harmer, N.J., Michell, S.L., Acharya, K.R. Description: The liga...) |
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- | '''Unreleased structure''' | ||
- | The | + | ==The ligand-bound, closed structure of CD0873, a substrate binding protein with adhesive properties from Clostridium difficile.== |
+ | <StructureSection load='6hni' size='340' side='right'caption='[[6hni]], [[Resolution|resolution]] 1.35Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[6hni]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6HNI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6HNI FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=TYR:TYROSINE'>TYR</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6hni FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6hni OCA], [https://pdbe.org/6hni PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6hni RCSB], [https://www.ebi.ac.uk/pdbsum/6hni PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6hni ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/Q18A65_CLOD6 Q18A65_CLOD6] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Clostridioides difficile is the primary cause of antibiotic-associated diarrhoea and colitis, a healthcare-associated intestinal disease resulting in a significant fatality rate. Colonization of the gut is critical for C. difficile pathogenesis, and the bacterial molecules essential for efficient colonization therefore offer great potential as vaccine candidates. Here we present findings demonstrating that the C. difficile immunogenic lipoprotein CD0873 plays a critical role in pathogen success in vivo. We found that in a dixenic colonization model, a CD0873-positive strain of C. difficile significantly outcompeted a CD0873-negative strain. Immunization of mice with recombinant CD0873 prevented long-term gut colonization and was correlated with a strong secretory IgA immune response. We further present high-resolution crystal structures of CD0873, at 1.80-2.50 A resolutions, offering a first view of the ligand-binding pocket of CD0873 and provide evidence that this lipoprotein adhesin is part of a tyrosine import system, an amino acid key in C. difficile infection. These findings suggest that CD0873 could serve as a effective component in a vaccine against C. difficile. | ||
- | + | Molecular features of lipoprotein CD0873 - a potential vaccine against the human pathogen Clostridioides difficile.,Bradshaw WJ, Bruxelle JF, Kovacs-Simon A, Harmer NJ, Janoir C, Pechine S, Acharya KR, Michell SL J Biol Chem. 2019 Aug 16. pii: RA119.010120. doi: 10.1074/jbc.RA119.010120. PMID:31420448<ref>PMID:31420448</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Acharya | + | <div class="pdbe-citations 6hni" style="background-color:#fffaf0;"></div> |
- | [[Category: Bradshaw | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
+ | [[Category: Clostridioides difficile 630]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Acharya KR]] | ||
+ | [[Category: Bradshaw WJ]] | ||
+ | [[Category: Harmer NJ]] | ||
+ | [[Category: Kovacs-Simon A]] | ||
+ | [[Category: Michell SL]] |
Current revision
The ligand-bound, closed structure of CD0873, a substrate binding protein with adhesive properties from Clostridium difficile.
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