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2qde

From Proteopedia

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[[Image:2qde.gif|left|200px]]
 
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{{Structure
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==Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1==
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|PDB= 2qde |SIZE=350|CAPTION= <scene name='initialview01'>2qde</scene>, resolution 1.93&Aring;
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<StructureSection load='2qde' size='340' side='right'caption='[[2qde]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=BA:BARIUM+ION'>BA</scene>
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<table><tr><td colspan='2'>[[2qde]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Aromatoleum_aromaticum_EbN1 Aromatoleum aromaticum EbN1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QDE FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
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|GENE= AZOSEA32060, AZOSEA32140, ebA5637, ebA5652 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=76114 Azoarcus sp. EbN1])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BA:BARIUM+ION'>BA</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4948 COG4948], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd03315 MLE_like]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qde OCA], [https://pdbe.org/2qde PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qde RCSB], [https://www.ebi.ac.uk/pdbsum/2qde PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qde ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qde TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qde FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qde OCA], [http://www.ebi.ac.uk/pdbsum/2qde PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qde RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/Q5P025_AROAE Q5P025_AROAE]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qd/2qde_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qde ConSurf].
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<div style="clear:both"></div>
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'''Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1'''
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==See Also==
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*[[Mandelate racemase|Mandelate racemase]]
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*[[Mandelate racemase/muconate lactonizing enzyme 3D structures|Mandelate racemase/muconate lactonizing enzyme 3D structures]]
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==About this Structure==
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__TOC__
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2QDE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Azoarcus_sp._ebn1 Azoarcus sp. ebn1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QDE OCA].
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</StructureSection>
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[[Category: Azoarcus sp. ebn1]]
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[[Category: Aromatoleum aromaticum EbN1]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Agarwal, R.]]
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[[Category: Agarwal R]]
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[[Category: Burley, S K.]]
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[[Category: Burley SK]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Swaminathan S]]
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[[Category: Swaminathan, S.]]
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[[Category: 9379a]]
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[[Category: crystal structure]]
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[[Category: enolase]]
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[[Category: new york structural genomix research consortium]]
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[[Category: nysgxrc]]
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[[Category: protein structure initiative]]
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[[Category: psi-2]]
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[[Category: psi-ii]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:47:56 2008''
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Current revision

Crystal structure of mandelate racemase/muconate lactonizing family protein from Azoarcus sp. EbN1

PDB ID 2qde

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