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| ==Structure and function of the FeoB G-domain from Methanococcus jannaschii== | | ==Structure and function of the FeoB G-domain from Methanococcus jannaschii== |
- | <StructureSection load='2wjg' size='340' side='right' caption='[[2wjg]], [[Resolution|resolution]] 2.20Å' scene=''> | + | <StructureSection load='2wjg' size='340' side='right'caption='[[2wjg]], [[Resolution|resolution]] 2.20Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
- | <table><tr><td colspan='2'>[[2wjg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WJG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WJG FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2wjg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WJG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WJG FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2Å</td></tr> |
- | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2wji|2wji]], [[2wjj|2wjj]], [[2wjh|2wjh]]</td></tr> | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr> |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wjg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wjg OCA], [http://pdbe.org/2wjg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2wjg RCSB], [http://www.ebi.ac.uk/pdbsum/2wjg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2wjg ProSAT]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wjg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wjg OCA], [https://pdbe.org/2wjg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wjg RCSB], [https://www.ebi.ac.uk/pdbsum/2wjg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wjg ProSAT]</span></td></tr> |
| </table> | | </table> |
| + | == Function == |
| + | [https://www.uniprot.org/uniprot/FEOB_METJA FEOB_METJA] Probable GTP-driven transporter of Fe(2+) ion (By similarity). |
| == Evolutionary Conservation == | | == Evolutionary Conservation == |
| [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
- | [[Category: Atcc 43067]] | + | [[Category: Large Structures]] |
- | [[Category: Herrmann, C]] | + | [[Category: Methanocaldococcus jannaschii]] |
- | [[Category: Koester, S]] | + | [[Category: Synthetic construct]] |
- | [[Category: Kuehlbrandt, W]] | + | [[Category: Herrmann C]] |
- | [[Category: Wehner, M]] | + | [[Category: Koester S]] |
- | [[Category: Yildiz, O]] | + | [[Category: Kuehlbrandt W]] |
- | [[Category: Cell membrane]] | + | [[Category: Wehner M]] |
- | [[Category: Ferrous iron transport]] | + | [[Category: Yildiz O]] |
- | [[Category: Gnbp]]
| + | |
- | [[Category: Gtp-binding]]
| + | |
- | [[Category: Ion transport]]
| + | |
- | [[Category: Iron]]
| + | |
- | [[Category: Iron transport]]
| + | |
- | [[Category: Membrane]]
| + | |
- | [[Category: Membrane g-protein]]
| + | |
- | [[Category: Metal transport]]
| + | |
- | [[Category: Nucleotide binding motif]]
| + | |
- | [[Category: Nucleotide-binding]]
| + | |
- | [[Category: Transmembrane]]
| + | |
- | [[Category: Transport]]
| + | |
| Structural highlights
Function
FEOB_METJA Probable GTP-driven transporter of Fe(2+) ion (By similarity).
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
FeoB in bacteria and archaea is involved in the uptake of ferrous iron (Fe(2+)), an important cofactor in biological electron transfer and catalysis. Unlike any other known prokaryotic membrane protein, FeoB contains a GTP-binding domain at its N-terminus. We determined high-resolution X-ray structures of the FeoB G-domain from Methanococcus jannaschii with and without bound GDP or Mg(2+)-GppNHp. The G-domain forms the same dimer in all three structures, with the nucleotide-binding pockets at the dimer interface, as in the ATP-binding domain of ABC transporters. The G-domain follows the typical fold of nucleotide-binding proteins, with a beta-strand inserted in switch I that becomes partially disordered upon GTP binding. Switch II does not contact the nucleotide directly and does not change its conformation in response to the bound nucleotide. Release of the nucleotide causes a rearrangement of loop L6, which we identified as the G5 region of FeoB. Together with the C-terminal helix, this loop may transmit the information about the nucleotide-bound state from the G-domain to the transmembrane region of FeoB.
Structure and function of the FeoB G-domain from Methanococcus jannaschii.,Koster S, Wehner M, Herrmann C, Kuhlbrandt W, Yildiz O J Mol Biol. 2009 Sep 18;392(2):405-19. Epub 2009 Jul 15. PMID:19615379[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
References
- ↑ Koster S, Wehner M, Herrmann C, Kuhlbrandt W, Yildiz O. Structure and function of the FeoB G-domain from Methanococcus jannaschii. J Mol Biol. 2009 Sep 18;392(2):405-19. Epub 2009 Jul 15. PMID:19615379 doi:10.1016/j.jmb.2009.07.020
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