2qgs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:27, 6 November 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qgs.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of SE1688 protein from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR89==
-
|PDB= 2qgs |SIZE=350|CAPTION= <scene name='initialview01'>2qgs</scene>, resolution 2.00&Aring;
+
<StructureSection load='2qgs' size='340' side='right'caption='[[2qgs]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
<table><tr><td colspan='2'>[[2qgs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_epidermidis_ATCC_12228 Staphylococcus epidermidis ATCC 12228]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QGS FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE= SE_1688 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176280 Staphylococcus epidermidis ATCC 12228])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1418 COG1418]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qgs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgs OCA], [https://pdbe.org/2qgs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qgs RCSB], [https://www.ebi.ac.uk/pdbsum/2qgs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qgs ProSAT], [https://www.topsan.org/Proteins/NESGC/2qgs TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qgs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qgs OCA], [http://www.ebi.ac.uk/pdbsum/2qgs PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qgs RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/A0A0H2VIU2_STAES A0A0H2VIU2_STAES]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of SE1688 protein from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR89'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qg/2qgs_consurf.spt"</scriptWhenChecked>
-
2QGS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_epidermidis_atcc_12228 Staphylococcus epidermidis atcc 12228]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QGS OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Staphylococcus epidermidis atcc 12228]]
+
</jmolCheckbox>
-
[[Category: Acton, T B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qgs ConSurf].
-
[[Category: Baran, M C.]]
+
<div style="clear:both"></div>
-
[[Category: Benach, J.]]
+
__TOC__
-
[[Category: Chen, C X.]]
+
</StructureSection>
-
[[Category: Cunningham, K.]]
+
[[Category: Large Structures]]
-
[[Category: Fang, Y.]]
+
[[Category: Staphylococcus epidermidis ATCC 12228]]
-
[[Category: Forouhar, F.]]
+
[[Category: Acton TB]]
-
[[Category: Hunt, J F.]]
+
[[Category: Baran MC]]
-
[[Category: Liu, J.]]
+
[[Category: Benach J]]
-
[[Category: Ma, L-C.]]
+
[[Category: Chen CX]]
-
[[Category: Montelione, G T.]]
+
[[Category: Cunningham K]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Fang Y]]
-
[[Category: Owen, L.]]
+
[[Category: Forouhar F]]
-
[[Category: Rost, B.]]
+
[[Category: Hunt JF]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Liu J]]
-
[[Category: Su, M.]]
+
[[Category: Ma L-C]]
-
[[Category: Tong, L.]]
+
[[Category: Montelione GT]]
-
[[Category: Xiao, R.]]
+
[[Category: Owen L]]
-
[[Category: alpha-helical protein]]
+
[[Category: Rost B]]
-
[[Category: nesg]]
+
[[Category: Seetharaman J]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Su M]]
-
[[Category: protein structure initiative]]
+
[[Category: Tong L]]
-
[[Category: psi-2]]
+
[[Category: Xiao R]]
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:49:11 2008''
+

Current revision

Crystal structure of SE1688 protein from Staphylococcus epidermidis. Northeast Structural Genomics Consortium target SeR89

PDB ID 2qgs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qgs"
Personal tools