2wr7
From Proteopedia
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==the structure of influenza H2 human singapore hemagglutinin with human receptor== | ==the structure of influenza H2 human singapore hemagglutinin with human receptor== | ||
- | <StructureSection load='2wr7' size='340' side='right' caption='[[2wr7]], [[Resolution|resolution]] 2.50Å' scene=''> | + | <StructureSection load='2wr7' size='340' side='right'caption='[[2wr7]], [[Resolution|resolution]] 2.50Å' scene=''> |
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'>[[2wr7]] is a 3 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2wr7]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus_(A/Singapore/1/1957(H2N2)) Influenza A virus (A/Singapore/1/1957(H2N2))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2WR7 FirstGlance]. <br> |
- | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5Å</td></tr> |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr> | |
- | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2wr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wr7 OCA], [https://pdbe.org/2wr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2wr7 RCSB], [https://www.ebi.ac.uk/pdbsum/2wr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2wr7 ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
- | [ | + | [https://www.uniprot.org/uniprot/HEMA_I57A5 HEMA_I57A5] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization either through clathrin-dependent endocytosis or through clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[HAMAP-Rule:MF_04072] |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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<jmolCheckbox> | <jmolCheckbox> | ||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wr/2wr7_consurf.spt"</scriptWhenChecked> | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wr/2wr7_consurf.spt"</scriptWhenChecked> | ||
- | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked> |
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
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==See Also== | ==See Also== | ||
- | *[[Hemagglutinin|Hemagglutinin]] | + | *[[Hemagglutinin 3D structures|Hemagglutinin 3D structures]] |
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Coombs | + | [[Category: Large Structures]] |
- | [[Category: Gamblin | + | [[Category: Coombs PJ]] |
- | [[Category: Haire | + | [[Category: Gamblin SJ]] |
- | [[Category: Liu | + | [[Category: Haire LF]] |
- | [[Category: Russell | + | [[Category: Liu J]] |
- | [[Category: Skehel | + | [[Category: Russell RJ]] |
- | [[Category: Stevens | + | [[Category: Skehel JJ]] |
- | [[Category: Walker | + | [[Category: Stevens DJ]] |
- | + | [[Category: Walker PA]] | |
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Current revision
the structure of influenza H2 human singapore hemagglutinin with human receptor
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Categories: Large Structures | Coombs PJ | Gamblin SJ | Haire LF | Liu J | Russell RJ | Skehel JJ | Stevens DJ | Walker PA