2qkp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 21 February 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qkp.gif|left|200px]]
 
-
{{Structure
+
==Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans==
-
|PDB= 2qkp |SIZE=350|CAPTION= <scene name='initialview01'>2qkp</scene>, resolution 1.750&Aring;
+
<StructureSection load='2qkp' size='340' side='right'caption='[[2qkp]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>
+
<table><tr><td colspan='2'>[[2qkp]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_mutans_UA159 Streptococcus mutans UA159]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QKP FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
|GENE= SMU_1151c ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1309 Streptococcus mutans])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2461 COG2461]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qkp OCA], [https://pdbe.org/2qkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qkp RCSB], [https://www.ebi.ac.uk/pdbsum/2qkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qkp ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2qkp TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qkp OCA], [http://www.ebi.ac.uk/pdbsum/2qkp PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qkp RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q8DU08_STRMU Q8DU08_STRMU]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qk/2qkp_consurf.spt"</scriptWhenChecked>
-
2QKP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QKP OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Single protein]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Streptococcus mutans]]
+
</jmolCheckbox>
-
[[Category: Almo, S C.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qkp ConSurf].
-
[[Category: Bain, K.]]
+
<div style="clear:both"></div>
-
[[Category: Burley, S K.]]
+
__TOC__
-
[[Category: Gheyi, T.]]
+
</StructureSection>
-
[[Category: Gilmore, M.]]
+
[[Category: Large Structures]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Streptococcus mutans UA159]]
-
[[Category: Ramagopal, U A.]]
+
[[Category: Almo SC]]
-
[[Category: Sauder, J M.]]
+
[[Category: Bain K]]
-
[[Category: Toro, R.]]
+
[[Category: Burley SK]]
-
[[Category: Wu, B.]]
+
[[Category: Gheyi T]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Gilmore M]]
-
[[Category: nysgxrc]]
+
[[Category: Ramagopal UA]]
-
[[Category: protein structure initiative]]
+
[[Category: Sauder JM]]
-
[[Category: psi-2]]
+
[[Category: Toro R]]
-
[[Category: structural genomic]]
+
[[Category: Wu B]]
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:50:19 2008''
+

Current revision

Crystal structure of C-terminal domain of SMU_1151c from Streptococcus mutans

PDB ID 2qkp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qkp"
Personal tools