2qlc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:16, 21 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qlc.jpg|left|200px]]
 
-
{{Structure
+
==The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS==
-
|PDB= 2qlc |SIZE=350|CAPTION= <scene name='initialview01'>2qlc</scene>, resolution 2.30&Aring;
+
<StructureSection load='2qlc' size='340' side='right'caption='[[2qlc]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND=
+
<table><tr><td colspan='2'>[[2qlc]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorobaculum_tepidum_TLS Chlorobaculum tepidum TLS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QLC FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
|GENE= radC, CT0611 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=194439 Chlorobium tepidum TLS])
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlc OCA], [https://pdbe.org/2qlc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qlc RCSB], [https://www.ebi.ac.uk/pdbsum/2qlc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qlc ProSAT], [https://www.topsan.org/Proteins/MCSG/2qlc TOPSAN]</span></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam04002 RadC]</span>
+
</table>
-
|RELATEDENTRY=
+
== Function ==
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qlc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qlc OCA], [http://www.ebi.ac.uk/pdbsum/2qlc PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qlc RCSB]</span>
+
[https://www.uniprot.org/uniprot/Y611_CHLTE Y611_CHLTE]
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2qlc_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2QLC is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Chlorobium_tepidum_tls Chlorobium tepidum tls]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QLC OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Chlorobium tepidum tls]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qlc ConSurf].
-
[[Category: Clancy, S.]]
+
<div style="clear:both"></div>
-
[[Category: Duggan, E.]]
+
__TOC__
-
[[Category: Joachimiak, A.]]
+
</StructureSection>
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Chlorobaculum tepidum TLS]]
-
[[Category: Zhang, R.]]
+
[[Category: Large Structures]]
-
[[Category: dna binding protein]]
+
[[Category: Clancy S]]
-
[[Category: dna repair protein]]
+
[[Category: Duggan E]]
-
[[Category: mcsg]]
+
[[Category: Joachimiak A]]
-
[[Category: midwest center for structural genomic]]
+
[[Category: Zhang R]]
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: radc]]
+
-
[[Category: structural genomic]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:50:34 2008''
+

Current revision

The crystal structure of DNA repair protein RadC from Chlorobium tepidum TLS

PDB ID 2qlc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools