2qmm

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[[Image:2qmm.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of APC86534.1 (C-terminal domain of NCBI AAB90184.1; Pfam BIG 123.1)==
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|PDB= 2qmm |SIZE=350|CAPTION= <scene name='initialview01'>2qmm</scene>, resolution 1.85&Aring;
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<StructureSection load='2qmm' size='340' side='right'caption='[[2qmm]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene>
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<table><tr><td colspan='2'>[[2qmm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QMM FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
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|GENE= AF_1056 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=224325 Archaeoglobus fulgidus DSM 4304])
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAM:S-ADENOSYLMETHIONINE'>SAM</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1901 COG1901]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qmm OCA], [https://pdbe.org/2qmm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qmm RCSB], [https://www.ebi.ac.uk/pdbsum/2qmm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qmm ProSAT], [https://www.topsan.org/Proteins/MCSG/2qmm TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qmm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qmm OCA], [http://www.ebi.ac.uk/pdbsum/2qmm PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qmm RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/TRMY_ARCFU TRMY_ARCFU] Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs.
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== Evolutionary Conservation ==
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'''Crystal structure of APC86534.1 (C-terminal domain of NCBI AAB90184.1; Pfam BIG 123.1)'''
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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==About this Structure==
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qm/2qmm_consurf.spt"</scriptWhenChecked>
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2QMM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_dsm_4304 Archaeoglobus fulgidus dsm 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QMM OCA].
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Archaeoglobus fulgidus dsm 4304]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Single protein]]
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</jmolCheckbox>
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[[Category: Duke, N.]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qmm ConSurf].
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[[Category: Gu, M.]]
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<div style="clear:both"></div>
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[[Category: Joachimiak, A.]]
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__TOC__
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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</StructureSection>
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[[Category: Zhou, M.]]
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[[Category: Archaeoglobus fulgidus DSM 4304]]
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[[Category: alpha/beta knot]]
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[[Category: Large Structures]]
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[[Category: mcsg]]
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[[Category: Duke N]]
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[[Category: midwest center for structural genomic]]
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[[Category: Gu M]]
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[[Category: protein structure initiative]]
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[[Category: Joachimiak A]]
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[[Category: psi-2]]
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[[Category: Zhou M]]
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[[Category: sam]]
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[[Category: structural genomic]]
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[[Category: unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:50:59 2008''
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Current revision

Crystal structure of APC86534.1 (C-terminal domain of NCBI AAB90184.1; Pfam BIG 123.1)

PDB ID 2qmm

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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