6f45

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (12:24, 9 May 2024) (edit) (undo)
 
Line 1: Line 1:
==Crystal structure of the gp37-gp38 adhesin tip complex of the bacteriophage S16 long tail fiber==
==Crystal structure of the gp37-gp38 adhesin tip complex of the bacteriophage S16 long tail fiber==
-
<StructureSection load='6f45' size='340' side='right' caption='[[6f45]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
+
<StructureSection load='6f45' size='340' side='right'caption='[[6f45]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6f45]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_bacteriophage_s16 Salmonella bacteriophage s16]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6F45 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6F45 FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6f45]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_phage_vB_SenM-S16 Salmonella phage vB_SenM-S16]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6F45 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6F45 FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7035582&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6f45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6f45 OCA], [http://pdbe.org/6f45 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6f45 RCSB], [http://www.ebi.ac.uk/pdbsum/6f45 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6f45 ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=MRD:(4R)-2-METHYLPENTANE-2,4-DIOL'>MRD</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6f45 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6f45 OCA], [https://pdbe.org/6f45 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6f45 RCSB], [https://www.ebi.ac.uk/pdbsum/6f45 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6f45 ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/M1EBB2_BPS16 M1EBB2_BPS16] Vg38 is at the tip of the long tail fibers and serves as the phage recognition site for the cellular receptor.[ARBA:ARBA00003549]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 20: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Salmonella bacteriophage s16]]
+
[[Category: Large Structures]]
-
[[Category: Dunne, M]]
+
[[Category: Salmonella phage vB_SenM-S16]]
-
[[Category: Klumpp, J]]
+
[[Category: Dunne M]]
-
[[Category: Leiman, P]]
+
[[Category: Klumpp J]]
-
[[Category: Loessner, M J]]
+
[[Category: Leiman P]]
-
[[Category: Bacteriophage]]
+
[[Category: Loessner MJ]]
-
[[Category: Helical sandwich]]
+
-
[[Category: Polyglycine]]
+
-
[[Category: Tail fiber]]
+
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of the gp37-gp38 adhesin tip complex of the bacteriophage S16 long tail fiber

PDB ID 6f45

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools