6mkr

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:33, 11 October 2023) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 6mkr is ON HOLD until Paper Publication
+
==5287 TCR bound to IAb Padi4==
 +
<StructureSection load='6mkr' size='340' side='right'caption='[[6mkr]], [[Resolution|resolution]] 3.35&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[6mkr]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6MKR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6MKR FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.355&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6mkr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6mkr OCA], [https://pdbe.org/6mkr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6mkr RCSB], [https://www.ebi.ac.uk/pdbsum/6mkr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6mkr ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/HA2B_MOUSE HA2B_MOUSE]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The neonatal thymus generates Foxp3(+) regulatory T (tTreg) cells that are critical in controlling immune homeostasis and preventing multiorgan autoimmunity. The role of antigen specificity on neonatal tTreg cell selection is unresolved. Here we identify 17 self-peptides recognized by neonatal tTreg cells, and reveal ligand specificity patterns that include self-antigens presented in an age- and inflammation-dependent manner. Fate-mapping studies of neonatal peptidyl arginine deiminase type IV (Padi4)-specific thymocytes reveal disparate fate choices. Neonatal thymocytes expressing T cell receptors that engage IA(b)-Padi4 with moderate dwell times within a conventional docking orientation are exported as tTreg cells. In contrast, Padi4-specific T cell receptors with short dwell times are expressed on CD4(+) T cells, while long dwell times induce negative selection. Temporally, Padi4-specific thymocytes are subject to a developmental stage-specific change in negative selection, which precludes tTreg cell development. Thus, a temporal switch in negative selection and ligand binding kinetics constrains the neonatal tTreg selection window.
-
Authors: Stadinski, B.D., Blevins, S.J., Huseby, E.S.
+
A temporal thymic selection switch and ligand binding kinetics constrain neonatal Foxp3(+) Treg cell development.,Stadinski BD, Blevins SJ, Spidale NA, Duke BR, Huseby PG, Stern LJ, Huseby ES Nat Immunol. 2019 Jun 17. pii: 10.1038/s41590-019-0414-1. doi:, 10.1038/s41590-019-0414-1. PMID:31209405<ref>PMID:31209405</ref>
-
Description: 5287 TCR bound to IAb Padi4
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Huseby, E.S]]
+
<div class="pdbe-citations 6mkr" style="background-color:#fffaf0;"></div>
-
[[Category: Stadinski, B.D]]
+
 
-
[[Category: Blevins, S.J]]
+
==See Also==
 +
*[[MHC 3D structures|MHC 3D structures]]
 +
*[[MHC II 3D structures|MHC II 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Mus musculus]]
 +
[[Category: Blevins SJ]]
 +
[[Category: Huseby ES]]
 +
[[Category: Stadinski BD]]

Current revision

5287 TCR bound to IAb Padi4

PDB ID 6mkr

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools