2qzu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:10, 2 July 2021) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2qzu.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123==
-
|PDB= 2qzu |SIZE=350|CAPTION= <scene name='initialview01'>2qzu</scene>, resolution 1.70&Aring;
+
<StructureSection load='2qzu' size='340' side='right'caption='[[2qzu]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2qzu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacfr Bacfr]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QZU FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|GENE= BF0881 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 Bacteroides fragilis YCH46])
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1auk|1auk]], [[1hdh|1hdh]]</div></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00884 Sulfatase], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG3119 AslA]</span>
+
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BF0881 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=295405 BACFR])</td></tr>
-
|RELATEDENTRY=[[1auk|1AUK]], [[1hdh|1HDH]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qzu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qzu OCA], [https://pdbe.org/2qzu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qzu RCSB], [https://www.ebi.ac.uk/pdbsum/2qzu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qzu ProSAT], [https://www.topsan.org/Proteins/NESGC/2qzu TOPSAN]</span></td></tr>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2qzu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qzu OCA], [http://www.ebi.ac.uk/pdbsum/2qzu PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2qzu RCSB]</span>
+
</table>
-
}}
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
'''Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123'''
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qz/2qzu_consurf.spt"</scriptWhenChecked>
-
==About this Structure==
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
2QZU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_ych46 Bacteroides fragilis ych46]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QZU OCA].
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Bacteroides fragilis ych46]]
+
</jmolCheckbox>
-
[[Category: Single protein]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qzu ConSurf].
-
[[Category: Abashidze, M.]]
+
<div style="clear:both"></div>
-
[[Category: Acton, T B.]]
+
__TOC__
-
[[Category: Cunningham, K.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Bacfr]]
-
[[Category: Maglaqui, M.]]
+
[[Category: Large Structures]]
-
[[Category: Montelione, G T.]]
+
[[Category: Abashidze, M]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Acton, T B]]
-
[[Category: Owens, L.]]
+
[[Category: Cunningham, K]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Hunt, J F]]
-
[[Category: Tong, L.]]
+
[[Category: Maglaqui, M]]
-
[[Category: Vorobiev, S M.]]
+
[[Category: Montelione, G T]]
-
[[Category: Wang, D.]]
+
[[Category: Structural genomic]]
-
[[Category: Xiao, R.]]
+
[[Category: Owens, L]]
-
[[Category: arylsulfatase]]
+
[[Category: Seetharaman, J]]
-
[[Category: bfr123]]
+
[[Category: Tong, L]]
-
[[Category: hydrolase]]
+
[[Category: Vorobiev, S M]]
-
[[Category: nesg]]
+
[[Category: Wang, D]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Xiao, R]]
-
[[Category: protein structure initiative]]
+
[[Category: Arylsulfatase]]
-
[[Category: psi-2]]
+
[[Category: Bfr123]]
-
[[Category: q64xz4_bacfr]]
+
[[Category: Hydrolase]]
-
[[Category: structural genomic]]
+
[[Category: Nesg]]
-
[[Category: sulfatase]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: yidj]]
+
[[Category: Q64xz4_bacfr]]
-
 
+
[[Category: Sulfatase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:55:05 2008''
+
[[Category: Yidj]]

Current revision

Crystal structure of the putative sulfatase yidJ from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR123

PDB ID 2qzu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2qzu"
Personal tools