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2r5r

From Proteopedia

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[[Image:2r5r.jpg|left|200px]]
 
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{{Structure
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==The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718==
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|PDB= 2r5r |SIZE=350|CAPTION= <scene name='initialview01'>2r5r</scene>, resolution 3.05&Aring;
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<StructureSection load='2r5r' size='340' side='right'caption='[[2r5r]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>
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<table><tr><td colspan='2'>[[2r5r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Niteu Niteu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R5R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R5R FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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|GENE= NE1163 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=228410 Nitrosomonas europaea ATCC 19718])
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1469 COG1469]</span>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NE1163 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=228410 NITEU])</td></tr>
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|RELATEDENTRY=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r5r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r5r OCA], [https://pdbe.org/2r5r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r5r RCSB], [https://www.ebi.ac.uk/pdbsum/2r5r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r5r ProSAT], [https://www.topsan.org/Proteins/MCSG/2r5r TOPSAN]</span></td></tr>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r5r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r5r OCA], [http://www.ebi.ac.uk/pdbsum/2r5r PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2r5r RCSB]</span>
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</table>
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}}
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== Function ==
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[[https://www.uniprot.org/uniprot/GCH4_NITEU GCH4_NITEU]] Converts GTP to 7,8-dihydroneopterin triphosphate.[HAMAP-Rule:MF_01527]
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'''The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718'''
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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==About this Structure==
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<jmolCheckbox>
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2R5R is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Nitrosomonas_europaea_atcc_19718 Nitrosomonas europaea atcc 19718]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R5R OCA].
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r5/2r5r_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r5r ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Niteu]]
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[[Category: Bargassa, M]]
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[[Category: Bigelow, L]]
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[[Category: Freeman, L]]
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[[Category: Joachimiak, A]]
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[[Category: Structural genomic]]
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[[Category: Nocek, B]]
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[[Category: Patterson, S]]
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[[Category: Tan, K]]
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[[Category: Wu, R]]
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[[Category: Apc86493]]
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[[Category: Duf198]]
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[[Category: Mcsg]]
[[Category: Nitrosomonas europaea atcc 19718]]
[[Category: Nitrosomonas europaea atcc 19718]]
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[[Category: Single protein]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Bargassa, M.]]
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[[Category: Unknown function]]
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[[Category: Bigelow, L.]]
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[[Category: Freeman, L.]]
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[[Category: Joachimiak, A.]]
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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[[Category: Nocek, B.]]
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[[Category: Patterson, S.]]
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[[Category: Tan, K.]]
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[[Category: Wu, R.]]
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[[Category: apc86493]]
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[[Category: duf198]]
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[[Category: mcsg]]
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[[Category: midwest center for structural genomic]]
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[[Category: nitrosomonas europaea atcc 19718]]
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[[Category: protein structure initiative]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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[[Category: unknown function]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:56:52 2008''
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Current revision

The crystal structure of DUF198 from Nitrosomonas europaea ATCC 19718

PDB ID 2r5r

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Proteopedia Page Contributors and Editors (what is this?)

OCA

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