2rad

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 6 November 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rad.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of the succinoglycan biosynthesis protein. Northeast structural Genomics Consortium target BcR135==
-
|PDB= 2rad |SIZE=350|CAPTION= <scene name='initialview01'>2rad</scene>, resolution 2.75&Aring;
+
<StructureSection load='2rad' size='340' side='right'caption='[[2rad]], [[Resolution|resolution]] 2.75&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
+
<table><tr><td colspan='2'>[[2rad]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_cereus_ATCC_14579 Bacillus cereus ATCC 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RAD FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.75&#8491;</td></tr>
-
|GENE= BC_3120 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226900 Bacillus cereus ATCC 14579])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2312 COG2312]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rad OCA], [https://pdbe.org/2rad PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rad RCSB], [https://www.ebi.ac.uk/pdbsum/2rad PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rad ProSAT], [https://www.topsan.org/Proteins/NESGC/2rad TOPSAN]</span></td></tr>
-
|RELATEDENTRY=[[2qgm|2QGM]]
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rad FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rad OCA], [http://www.ebi.ac.uk/pdbsum/2rad PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rad RCSB]</span>
+
== Function ==
-
}}
+
[https://www.uniprot.org/uniprot/Q81BN2_BACCR Q81BN2_BACCR]
-
 
+
== Evolutionary Conservation ==
-
'''Crystal structure of the succinoglycan biosynthesis protein. Northeast structural Genomics Consortium target BcR135'''
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
 
+
<jmolCheckbox>
-
==About this Structure==
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2rad_consurf.spt"</scriptWhenChecked>
-
2RAD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_atcc_14579 Bacillus cereus atcc 14579]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAD OCA].
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Bacillus cereus atcc 14579]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Single protein]]
+
</jmolCheckbox>
-
[[Category: Abashidze, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rad ConSurf].
-
[[Category: Acton, T B.]]
+
<div style="clear:both"></div>
-
[[Category: Baran, M C.]]
+
__TOC__
-
[[Category: Cunningham, K.]]
+
</StructureSection>
-
[[Category: Hunt, J F.]]
+
[[Category: Bacillus cereus ATCC 14579]]
-
[[Category: Kuzin, A P.]]
+
[[Category: Large Structures]]
-
[[Category: Liu, J.]]
+
[[Category: Abashidze M]]
-
[[Category: Mao, L.]]
+
[[Category: Acton TB]]
-
[[Category: Montelione, G T.]]
+
[[Category: Baran MC]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Cunningham K]]
-
[[Category: Rost, B.]]
+
[[Category: Hunt JF]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Kuzin AP]]
-
[[Category: Tong, L.]]
+
[[Category: Liu J]]
-
[[Category: Wang, H.]]
+
[[Category: Mao L]]
-
[[Category: Xiao, R.]]
+
[[Category: Montelione GT]]
-
[[Category: bcr135]]
+
[[Category: Rost B]]
-
[[Category: biosynthetic protein]]
+
[[Category: Seetharaman J]]
-
[[Category: nesg]]
+
[[Category: Tong L]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Wang H]]
-
[[Category: protein structure initiative]]
+
[[Category: Xiao R]]
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: succinoglycan biosynthesis protein]]
+
-
[[Category: unknown function]]
+
-
[[Category: x-ray]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:58:09 2008''
+

Current revision

Crystal structure of the succinoglycan biosynthesis protein. Northeast structural Genomics Consortium target BcR135

PDB ID 2rad

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools