2rag

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:29, 6 November 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2rag.jpg|left|200px]]
 
-
{{Structure
+
==Crystal structure of aminohydrolase from Caulobacter crescentus==
-
|PDB= 2rag |SIZE=350|CAPTION= <scene name='initialview01'>2rag</scene>, resolution 2.00&Aring;
+
<StructureSection load='2rag' size='340' side='right'caption='[[2rag]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
|SITE=
+
== Structural highlights ==
-
|LIGAND= <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
+
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RAG FirstGlance]. <br>
-
|ACTIVITY=
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
|GENE= CC_2746 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=190650 Caulobacter crescentus CB15])
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd01301 rDP_like]</span>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rag FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rag OCA], [https://pdbe.org/2rag PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rag RCSB], [https://www.ebi.ac.uk/pdbsum/2rag PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rag ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2rag TOPSAN]</span></td></tr>
-
|RELATEDENTRY=
+
</table>
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rag FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rag OCA], [http://www.ebi.ac.uk/pdbsum/2rag PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rag RCSB]</span>
+
== Evolutionary Conservation ==
-
}}
+
[[Image:Consurf_key_small.gif|200px|right]]
-
 
+
Check<jmol>
-
'''Crystal structure of aminohydrolase from Caulobacter crescentus'''
+
<jmolCheckbox>
-
 
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ra/2rag_consurf.spt"</scriptWhenChecked>
-
 
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
==About this Structure==
+
<text>to colour the structure by Evolutionary Conservation</text>
-
2RAG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Caulobacter_crescentus_cb15 Caulobacter crescentus cb15]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RAG OCA].
+
</jmolCheckbox>
-
[[Category: Caulobacter crescentus cb15]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rag ConSurf].
-
[[Category: Single protein]]
+
<div style="clear:both"></div>
-
[[Category: Almo, S C.]]
+
__TOC__
-
[[Category: Burley, S K.]]
+
</StructureSection>
-
[[Category: Fedorov, A A.]]
+
[[Category: Large Structures]]
-
[[Category: Fedorov, E V.]]
+
[[Category: Almo SC]]
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
[[Category: Burley SK]]
-
[[Category: Sauder, J M.]]
+
[[Category: Fedorov AA]]
-
[[Category: Toro, R.]]
+
[[Category: Fedorov EV]]
-
[[Category: aminohydrolase]]
+
[[Category: Sauder JM]]
-
[[Category: new york structural genomix research consortium]]
+
[[Category: Toro R]]
-
[[Category: nysgxrc]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi-2]]
+
-
[[Category: structural genomic]]
+
-
[[Category: target 9257a]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:58:13 2008''
+

Current revision

Crystal structure of aminohydrolase from Caulobacter crescentus

PDB ID 2rag

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools