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2rb7

From Proteopedia

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[[Image:2rb7.jpg|left|200px]]
 
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{{Structure
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==Crystal structure of co-catalytic metallopeptidase (YP_387682.1) from Desulfovibrio desulfuricans G20 at 1.60 A resolution==
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|PDB= 2rb7 |SIZE=350|CAPTION= <scene name='initialview01'>2rb7</scene>, resolution 1.600&Aring;
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<StructureSection load='2rb7' size='340' side='right'caption='[[2rb7]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>
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<table><tr><td colspan='2'>[[2rb7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Oleidesulfovibrio_alaskensis_G20 Oleidesulfovibrio alaskensis G20]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RB7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RB7 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
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|GENE= YP_387682.1, Dde_1186 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=207559 Desulfovibrio desulfuricans G20])
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rb7 OCA], [https://pdbe.org/2rb7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rb7 RCSB], [https://www.ebi.ac.uk/pdbsum/2rb7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rb7 ProSAT], [https://www.topsan.org/Proteins/JCSG/2rb7 TOPSAN]</span></td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK08651 PRK08651], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK07522 PRK07522]</span>
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</table>
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|RELATEDENTRY=
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== Function ==
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rb7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rb7 OCA], [http://www.ebi.ac.uk/pdbsum/2rb7 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rb7 RCSB]</span>
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[https://www.uniprot.org/uniprot/Q313A9_OLEA2 Q313A9_OLEA2]
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}}
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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'''Crystal structure of co-catalytic metallopeptidase (YP_387682.1) from Desulfovibrio desulfuricans G20 at 1.60 A resolution'''
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rb/2rb7_consurf.spt"</scriptWhenChecked>
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==About this Structure==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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2RB7 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Desulfovibrio_desulfuricans_g20 Desulfovibrio desulfuricans g20]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RB7 OCA].
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Desulfovibrio desulfuricans g20]]
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</jmolCheckbox>
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[[Category: Single protein]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rb7 ConSurf].
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[[Category: JCSG, Joint Center for Structural Genomics.]]
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<div style="clear:both"></div>
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[[Category: co-catalytic metallopeptidase]]
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__TOC__
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[[Category: hydrolase]]
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</StructureSection>
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[[Category: jcsg]]
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[[Category: Large Structures]]
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[[Category: joint center for structural genomic]]
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[[Category: Oleidesulfovibrio alaskensis G20]]
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[[Category: peptidase family m20/m25/m40]]
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[[Category: protein structure initiative]]
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[[Category: psi]]
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[[Category: structural genomic]]
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[[Category: yp_387682 1]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 04:58:28 2008''
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Current revision

Crystal structure of co-catalytic metallopeptidase (YP_387682.1) from Desulfovibrio desulfuricans G20 at 1.60 A resolution

PDB ID 2rb7

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