This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6def

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:04, 11 October 2023) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
==Vps1 GTPase-BSE fusion complexed with GMPPCP==
==Vps1 GTPase-BSE fusion complexed with GMPPCP==
-
<StructureSection load='6def' size='340' side='right' caption='[[6def]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
+
<StructureSection load='6def' size='340' side='right'caption='[[6def]], [[Resolution|resolution]] 2.26&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6def]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Chatd Chatd]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DEF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6DEF FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6def]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_DSM_1495 Chaetomium thermophilum var. thermophilum DSM 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6DEF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6DEF FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.26&#8491;</td></tr>
-
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CTHT_0061810 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 CHATD])</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GCP:PHOSPHOMETHYLPHOSPHONIC+ACID+GUANYLATE+ESTER'>GCP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6def FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6def OCA], [http://pdbe.org/6def PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6def RCSB], [http://www.ebi.ac.uk/pdbsum/6def PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6def ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6def FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6def OCA], [https://pdbe.org/6def PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6def RCSB], [https://www.ebi.ac.uk/pdbsum/6def PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6def ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/G0SFF0_CHATD G0SFF0_CHATD]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Chatd]]
+
[[Category: Chaetomium thermophilum var. thermophilum DSM 1495]]
-
[[Category: Brady, T M]]
+
[[Category: Large Structures]]
-
[[Category: Chappie, J S]]
+
[[Category: Brady TM]]
-
[[Category: Ford, M G.J]]
+
[[Category: Chappie JS]]
-
[[Category: Hosford, C J]]
+
[[Category: Ford MGJ]]
-
[[Category: Varlakhanova, N V]]
+
[[Category: Hosford CJ]]
-
[[Category: Drp]]
+
[[Category: Varlakhanova NV]]
-
[[Category: Dynamin-related protein]]
+
-
[[Category: Endosome]]
+
-
[[Category: Gmppcp]]
+
-
[[Category: Gtpase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Vacuolar protein sorting 1]]
+
-
[[Category: Vacuole]]
+
-
[[Category: Vps1]]
+

Current revision

Vps1 GTPase-BSE fusion complexed with GMPPCP

PDB ID 6def

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools