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2rk9

From Proteopedia

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[[Image:2rk9.gif|left|200px]]
 
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{{Structure
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==The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01==
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|PDB= 2rk9 |SIZE=350|CAPTION= <scene name='initialview01'>2rk9</scene>, resolution 1.60&Aring;
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<StructureSection load='2rk9' size='340' side='right'caption='[[2rk9]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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<table><tr><td colspan='2'>[[2rk9]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibs1 Vibs1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RK9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RK9 FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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|GENE= 84385607, V12B01_25774 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=314291 Vibrio splendidus 12B01])
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">84385607, V12B01_25774 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=314291 VIBS1])</td></tr>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam00903 Glyoxalase]</span>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rk9 OCA], [https://pdbe.org/2rk9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rk9 RCSB], [https://www.ebi.ac.uk/pdbsum/2rk9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rk9 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2rk9 TOPSAN]</span></td></tr>
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|RELATEDENTRY=
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2rk9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rk9 OCA], [http://www.ebi.ac.uk/pdbsum/2rk9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2rk9 RCSB]</span>
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== Evolutionary Conservation ==
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}}
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rk/2rk9_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rk9 ConSurf].
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<div style="clear:both"></div>
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'''The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01'''
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==See Also==
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*[[Dioxygenase 3D structures|Dioxygenase 3D structures]]
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*[[Glyoxalase 3D structures|Glyoxalase 3D structures]]
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==About this Structure==
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__TOC__
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2RK9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_splendidus_12b01 Vibrio splendidus 12b01]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RK9 OCA].
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</StructureSection>
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Vibrio splendidus 12b01]]
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[[Category: Vibs1]]
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[[Category: Burley, S K.]]
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[[Category: Burley, S K]]
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[[Category: Eswaramoorthy, S.]]
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[[Category: Eswaramoorthy, S]]
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[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
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[[Category: Structural genomic]]
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[[Category: Sauder, J M.]]
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[[Category: Sauder, J M]]
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[[Category: Swaminathan, S.]]
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[[Category: Swaminathan, S]]
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[[Category: Tyagi, R.]]
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[[Category: Tyagi, R]]
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[[Category: 11005r]]
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[[Category: Glyoxalase/bleomycin resistance protein/dioxygenase superfamily]]
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[[Category: glyoxalase/bleomycin resistance protein/dioxygenase superfamily]]
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[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
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[[Category: new york structural genomix research consortium]]
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[[Category: Oxidoreductase]]
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[[Category: nysgxrc]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: oxidoreductase]]
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[[Category: protein structure initiative ii]]
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[[Category: psi-2]]
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[[Category: structural genomic]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 05:01:23 2008''
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Current revision

The crystal structure of a glyoxalase/bleomycin resistance protein/dioxygenase superfamily member from Vibrio splendidus 12B01

PDB ID 2rk9

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